RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSH3-210ENST00000532881 TPH2Q8IWU9 490 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 GOLGA6L1Q8N7Z2 621 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 AMNQ9BXJ7 453 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSH3-210ENST00000532881 ARMCX3Q9UH62 379 aaPredicted RBP16.34■□□□□ 0.21
SSH3-210ENST00000532881 KCNK3O14649 394 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 PRLRP16471 622 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 MAEAQ7L5Y9 396 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 RDH13Q8NBN7 331 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 PI4KBQ9UBF8 816 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 ASTN1O14525 1302 aa16.34■□□□□ 0.21
SSH3-210ENST00000532881 LRRN2O75325 713 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 CFAP221Q4G0U5 840 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.21
SSH3-210ENST00000532881 SRLQ86TD4 932 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.21
SSH3-210ENST00000532881 ZIM3Q96PE6 472 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 TMEM51Q9NW97 253 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 PKD2L1Q9P0L9 805 aa16.33■□□□□ 0.21
SSH3-210ENST00000532881 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 CHRNA5P30532 468 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 MEI1Q5TIA1 1274 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 ANKRD31Q8N7Z5 1873 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 ACER1Q8TDN7 264 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 IQCDQ96DY2 449 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 EIF2AK1Q9BQI3 630 aaKnown RBP16.33■□□□□ 0.2
SSH3-210ENST00000532881 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.2
SSH3-210ENST00000532881 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 CYP3A7P24462 503 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 RPA1P27694 616 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 AOC3Q16853 763 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 EXOC3L4Q17RC7 722 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
SSH3-210ENST00000532881 CASKIN2Q8WXE0 1202 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
SSH3-210ENST00000532881 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.2
SSH3-210ENST00000532881 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
SSH3-210ENST00000532881 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 RAD51CO43502 376 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 ECE2O60344 883 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 GFPT2O94808 682 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 NR3C1P04150 777 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 XRCC5P13010 732 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 SLFN12Q8IYM2 578 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 FAM76AQ8TAV0 307 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 MKL1Q969V6 931 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 TCP10L2B9ZVM9 353 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 DDX39AO00148 427 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 TGFB1I1O43294 461 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 NPR1P16066 1061 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 MARSP56192 900 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 RNF10Q8N5U6 811 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
SSH3-210ENST00000532881 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
SSH3-210ENST00000532881 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 EPM2AIP1Q7L775 607 aaPredicted RBP16.31■□□□□ 0.2
SSH3-210ENST00000532881 BANK1Q8NDB2 785 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 DCAF4Q8WV16 495 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 SLC35C1Q96A29 364 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 INPP4AQ96PE3 977 aaPredicted RBP16.31■□□□□ 0.2
SSH3-210ENST00000532881 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 NAGPAQ9UK23 515 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 TISP43B9A030 160 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 CEP104O60308 925 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 GNA14O95837 355 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 TRIM49P0CI25 452 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 TRIM49CP0CI26 452 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 BMP3P12645 472 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 ITGA4P13612 1032 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 EPHB4P54760 987 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
SSH3-210ENST00000532881 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
SSH3-210ENST00000532881 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 EDEM3Q9BZQ6 932 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 OSGEPQ9NPF4 335 aa16.31■□□□□ 0.2
SSH3-210ENST00000532881 CHORDC1Q9UHD1 332 aaPredicted RBP16.31■□□□□ 0.2
SSH3-210ENST00000532881 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms