RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZIM3Q96PE6 472 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 KRT12Q99456 494 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 TAF1DQ9H5J8 278 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 PI4KBQ9UBF8 816 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 SERTAD1Q9UHV2 236 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 GGA2Q9UJY4 613 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 EME2A4GXA9 379 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 TXNDC9O14530 226 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 FESP07332 822 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 KCNA3P22001 575 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 MAGEA8P43361 318 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 RAB27AP51159 221 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 PDE6CP51160 858 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 DGKZQ13574 1117 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 NSUN7Q8NE18 718 aaKnown RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 RAB3IL1Q8TBN0 382 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 GPKOWQ92917 476 aaPredicted RBP eCLIP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 RRP36Q96EU6 259 aaKnown RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 SMC6Q96SB8 1091 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 TRIM31Q9BZY9 425 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 KDM4CQ9H3R0 1056 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ECT2Q9H8V3 914 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 RNF14Q9UBS8 474 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 C2CD2Q9Y426 696 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 PARP4Q9UKK3 1724 aaKnown RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 SHOX2O60902 331 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CIB2O75838 187 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP1A1P05023 1023 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MMEP08473 750 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 TROVE2P10155 538 aaKnown RBP eCLIP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CA8P35219 290 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 PAK1Q13153 545 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CUL4BQ13620 913 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 SLC39A14Q15043 492 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 NECTIN1Q15223 517 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 NME8Q8N427 588 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MAB21L3Q8N8X9 362 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 PNMA1Q8ND90 353 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 LZICQ8WZA0 190 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF653Q96CK0 615 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CCDC77Q9BR77 488 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ZHX3Q9H4I2 956 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CNNM2Q9H8M5 875 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 EPB41L4AQ9HCS5 686 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 TMOD4Q9NZQ9 345 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 KCNJ14Q9UNX9 436 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 FLT1P17948 1338 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 NEDD4P46934 1319 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CFBP00751 764 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 LMNAP02545 664 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 GSTA2P09210 222 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 FAM200BP0CF97 657 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 HMGCS2P54868 508 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 COL9A3Q14050 684 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 SUPT20HL1Q3ZLR7 823 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 EEPD1Q7L9B9 569 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 LRRC8CQ8TDW0 803 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 LRRC1Q9BTT6 524 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP8A2Q9NTI2 1148 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ARPP21Q9UBL0 812 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 BAZ2BQ9UIF8 2168 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 PHF20L1A8MW92 1017 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MAP3K7O43318 606 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ACTN4O43707 911 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ECEL1O95672 775 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 BMP15O95972 392 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 ALAS1P13196 640 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 TAL1P17542 331 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CXCR5P32302 372 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 STX2P32856 288 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 NAPAP54920 295 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MAGOHP61326 146 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 USP4Q13107 963 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MIER3Q7Z3K6 550 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 APBB1IPQ7Z5R6 666 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 SMC1BQ8NDV3 1235 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 CEP70Q8NHQ1 597 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 DNAJC9Q8WXX5 260 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 KCNB2Q92953 911 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 MAGOHBQ96A72 148 aaKnown RBP7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 AIFM3Q96NN9 605 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 OLFM3Q96PB7 478 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 NUDCD1Q96RS6 583 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 RABGAP1Q9Y3P9 1069 aa7.36□□□□□ -1.23
TGFBR3-209ENST00000532540 GSTA1P08263 222 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 GHRP10912 638 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 COPB1P53618 953 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 RCN2Q14257 317 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 MIS18BP1Q6P0N0 1132 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD42Q8N9B4 389 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 CEP95Q96GE4 821 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SLC39A2Q9NP94 309 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF609O15014 1411 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SPDYE2BA6NHP3 402 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms