RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ARHGEF16Q5VV41 709 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 CCSAPQ6IQ19 270 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 TSHZ1Q6ZSZ6 1077 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 RBBP6Q7Z6E9 1792 aaKnown RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 RNF180Q86T96 592 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 FBXO16Q8IX29 292 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DOCK3Q8IZD9 2030 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 SAMD3Q8N6K7 520 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 NSUN6Q8TEA1 469 aaKnown RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 BAP1Q92560 729 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DPF3Q92784 378 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 LENG1Q96BZ8 264 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 C8orf48Q96LL4 319 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 HS3ST6Q96QI5 342 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 RMDN3Q96TC7 470 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 AGXT2Q9BYV1 514 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 KATNBL1Q9H079 304 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DNAJC25Q9H1X3 360 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 VTA1Q9NP79 307 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 PDRG1Q9NUG6 133 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DDX49Q9Y6V7 483 aaKnown RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 V9GY48 417 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DUSP11O75319 330 aaKnown RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 COL6A1P12109 1028 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 EIF2AK2P19525 551 aaKnown RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 EDNRBP24530 442 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 CDC27P30260 824 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 ADD1P35611 737 aaKnown RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 ADCYAP1R1P41586 468 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 ST13P50502 369 aaKnown RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 EVCP57679 992 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 AMPD3Q01432 767 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 GHRHRQ02643 423 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 TOB2Q14106 344 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 LRRC41Q15345 812 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 STXBP2Q15833 593 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 IQSEC1Q6DN90 963 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 TAPT1Q6NXT6 567 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 HEATR3Q7Z4Q2 680 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 FERMT3Q86UX7 667 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 FCHSD1Q86WN1 690 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 CUL5Q93034 780 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 DEPDC7Q96QD5 511 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 TAAR1Q96RJ0 339 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 IWS1Q96ST2 819 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 WDR11Q9BZH6 1224 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 SENP6Q9GZR1 1112 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 AP5M1Q9H0R1 490 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 PSTPIP2Q9H939 334 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 PXMP2Q9NR77 195 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 PDGFCQ9NRA1 345 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 COL20A1Q9P218 1284 aa6.62□□□□□ -1.35
HMGB1P42-201ENST00000532126 CNTNAP5Q8WYK1 1306 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SYNRGQ9UMZ2 1314 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 MAFGO15525 162 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ADCY6O43306 1168 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SH3BP5O60239 455 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ADAMTS4O75173 837 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 NR3C2P08235 984 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 C6orf222P0C671 652 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 TXNP10599 105 aaKnown RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 MYCLP12524 364 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SMPD1P17405 629 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 NAPAP54920 295 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 GJA9P57773 515 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 AKAP17AQ02040 695 aaKnown RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 C8orf34Q49A92 452 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 GNASQ5JWF2 1037 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 TLK2Q86UE8 772 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 TTC16Q8NEE8 873 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SCFD2Q8WU76 684 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 FERMT2Q96AC1 680 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 ZNF274Q96GC6 653 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 RPS6KC1Q96S38 1066 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SLC6A16Q9GZN6 736 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SAP130Q9H0E3 1048 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 SNTG2Q9NY99 539 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 PCDH10Q9P2E7 1040 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 NR2E3Q9Y5X4 410 aa6.61□□□□□ -1.35
HMGB1P42-201ENST00000532126 CENPFP49454 3210 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 NID2Q14112 1375 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 MYADML2A6NDP7 307 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 hCG_1984214I3L0E3 225 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 MEIS2O14770 477 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 CPLX1O14810 134 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PRPF3O43395 683 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 SCG2P13521 617 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms