RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 AZI2Q9H6S1 392 aa17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 RALGAPA2Q2PPJ7 1873 aa17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 NLRC5Q86WI3 1866 aa17.37■□□□□ 0.37
DEPDC7-204ENST00000532078 RRN3P2A6NIE6 340 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 GOLGA8AA7E2F4 631 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 EXOSC10Q01780 885 aaKnown RBP17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 MGAT3Q09327 533 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 TIGD5Q53EQ6 642 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 MXRA8Q9BRK3 442 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 GLT8D2Q9H1C3 349 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 UBE2ZQ9H832 354 aaPredicted RBP17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 KCNH7Q9NS40 1196 aa17.36■□□□□ 0.37
DEPDC7-204ENST00000532078 DPYSL4O14531 572 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 CDC45O75419 566 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 COL9A1P20849 921 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 RCAN1P53805 252 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 IGBP1P78318 339 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 FUT2Q10981 343 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 LPIN1Q14693 890 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 TSGA10IPQ3SY00 556 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 TYW1BQ6NUM6 668 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 TMEM192Q8IY95 271 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 IL17RAQ96F46 866 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 TCEANC2Q96MN5 208 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 ANO3Q9BYT9 981 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 NFASCO94856 1347 aa17.35■□□□□ 0.37
DEPDC7-204ENST00000532078 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 H3BNC9 293 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 STXBP3O00186 592 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 HMGB1P09429 215 aaKnown RBP17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 ACTR2P61160 394 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 MRPS6P82932 125 aaKnown RBP17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 GPM6BQ13491 265 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 FBXO47Q5MNV8 452 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 TSHZ1Q6ZSZ6 1077 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 PCYT2Q99447 389 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 BARHL2Q9NY43 387 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 CDY2AQ9Y6F7 541 aa17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 V9GY48 417 aaPredicted RBP17.34■□□□□ 0.37
DEPDC7-204ENST00000532078 ADGRA3Q8IWK6 1321 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 SMCO2A6NFE2 343 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 M0QZ92 97 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 INSRRP14616 1297 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 SREBF1P36956 1147 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 ZNF687Q8N1G0 1237 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 FIBCD1Q8N539 461 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 PGBD1Q96JS3 809 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM49AQ9H0Q0 323 aaPredicted RBP17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
DEPDC7-204ENST00000532078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 KCNA5P22460 613 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 CTNNB1P35222 781 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 FGD1P98174 961 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 ITGB3BPQ13352 177 aaPredicted RBP17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 LEXMQ3ZCV2 418 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 IER5Q5VY09 327 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 NIPA1Q7RTP0 329 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 PLPPR4Q7Z2D5 763 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 AGO4Q9HCK5 861 aaKnown RBP17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 SQORQ9Y6N5 450 aa17.32■□□□□ 0.36
DEPDC7-204ENST00000532078 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 MEIS1O00470 390 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 ARP10275 920 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 ZNF76P36508 570 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 CLK2P49760 499 aaKnown RBP17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 SLC26A2P50443 739 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 STAT5BP51692 787 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 PLCB4Q15147 1175 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 RC3H2Q9HBD1 1191 aaKnown RBP17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 TRPV2Q9Y5S1 764 aa17.31■□□□□ 0.36
DEPDC7-204ENST00000532078 C5orf67F2Z3F1 127 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 ENPP3O14638 875 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 RB1P06400 928 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 CDC27P30260 824 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 CD52P31358 61 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 METAP2P50579 478 aaKnown RBP eCLIP17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 TRAPPC12Q8WVT3 735 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 ZBTB10Q96DT7 871 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 NSUN3Q9H649 340 aaKnown RBP17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 TMEM260Q9NX78 707 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms