RNA–Protein interactions for RNA: ENST00000532032.5

ATXN3-215, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-215ENST00000532032 ADAM17P78536 824 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-215ENST00000532032 ZNF654Q8IZM8 581 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 ADAMTS17Q8TE56 1095 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 DDX11Q96FC9 970 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 EFR3BQ9Y2G0 817 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 SUGT1Q9Y2Z0 365 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-215ENST00000532032 FUCA1P04066 466 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 NTRK1P04629 796 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 C8BP07358 591 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 HSPA5P11021 654 aaKnown RBP6.9□□□□□ -1.3
ATXN3-215ENST00000532032 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.3
ATXN3-215ENST00000532032 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 GORASP1Q9BQQ3 440 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 PCDH18Q9HCL0 1135 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.3
ATXN3-215ENST00000532032 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-215ENST00000532032 DCP2Q8IU60 420 aaKnown RBP6.89□□□□□ -1.31
ATXN3-215ENST00000532032 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-215ENST00000532032 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
ATXN3-215ENST00000532032 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-215ENST00000532032 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 THBS2P35442 1172 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 ETV3LQ6ZN32 361 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-215ENST00000532032 ZNF513Q8N8E2 541 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-215ENST00000532032 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-215ENST00000532032 PLEKHO2Q8TD55 490 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 RASGRP4Q8TDF6 673 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 COPS5Q92905 334 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 MMP19Q99542 508 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 C11orf84Q9BUA3 381 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-215ENST00000532032 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-215ENST00000532032 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-215ENST00000532032 PLATP00750 562 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 RPL13P26373 211 aaKnown RBP6.87□□□□□ -1.31
ATXN3-215ENST00000532032 MIB1Q86YT6 1006 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 KYQ8NBH2 561 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 AP5M1Q9H0R1 490 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-215ENST00000532032 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
ATXN3-215ENST00000532032 PLS3P13797 630 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 TNFRSF1AP19438 455 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 CASP7P55210 303 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 KIAA2012Q0VF49 1180 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 SCRN1Q12765 414 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 TBC1D10BQ4KMP7 808 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-215ENST00000532032 FAM26FQ5R3K3 315 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 CPZQ66K79 652 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 KIAA1211LQ6NV74 962 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 CRACR2BQ8N4Y2 399 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-215ENST00000532032 DPF3Q92784 378 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-215ENST00000532032 SAMD11Q96NU1 681 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 PODXL2Q9NZ53 605 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 APEX2Q9UBZ4 518 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-215ENST00000532032 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-215ENST00000532032 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 SGSM2O43147 1006 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 KCNH1O95259 989 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 RECKO95980 971 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 POMZP3Q6PJE2 187 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 SHDQ96IW2 340 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 SYT3Q9BQG1 590 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-215ENST00000532032 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-215ENST00000532032 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 ZBED9Q6R2W3 1325 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 MATN3O15232 486 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 THBDP07204 575 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 VHLLQ6RSH7 139 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 CD300LDQ6UXZ3 194 aa6.84□□□□□ -1.31
ATXN3-215ENST00000532032 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-215ENST00000532032 ZC3H18Q86VM9 953 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms