RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 LMAN2LQ9H0V9 348 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 C6orf50Q9HD87 102 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 TBC1D22BQ9NU19 505 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 TMEM260Q9NX78 707 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 SIP14410 1827 aa15.17■□□□□ 0.02
AMBRA1-210ENST00000531542 DOCK5Q9H7D0 1870 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 COL4A4P53420 1690 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 BRWD1Q9NSI6 2320 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 M0QZ92 97 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 IPO5O00410 1097 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 NCK2O43639 380 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 DGKIO75912 1065 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 REC8O95072 547 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 RPS6KB1P23443 525 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 CIITAP33076 1130 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 ZNF76P36508 570 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 BMPR1AP36894 532 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 IGBP1P78318 339 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 BLOC1S2Q6QNY1 142 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 REXO1Q8N1G1 1221 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 BRF1Q92994 677 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 C11orf84Q9BUA3 381 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 RNF26Q9BY78 433 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 TRPV2Q9Y5S1 764 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
AMBRA1-210ENST00000531542 PSMA5P28066 241 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 APOBRQ0VD83 1088 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 NTRK3Q16288 839 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 ZNF484Q5JVG2 852 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 MIS18BP1Q6P0N0 1132 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 RTN4RL1Q86UN2 441 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 SMAP1Q8IYB5 467 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 NEK9Q8TD19 979 aa15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 FAM49AQ9H0Q0 323 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-210ENST00000531542 KAT6AQ92794 2004 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 RBAK-RBAKDNI3L0D1 243 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 CPA1P15085 419 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 IFNAR1P17181 557 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 KLRC1P26715 233 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 CD52P31358 61 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 KRT76Q01546 638 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 NPAS4Q8IUM7 802 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 CCDC60Q8IWA6 550 aaPredicted RBP15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 CMTR2Q8IYT2 770 aaKnown RBP15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 P2RX5Q93086 422 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 NSUN3Q9H649 340 aaKnown RBP15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 PADI3Q9ULW8 664 aa15.14■□□□□ 0.01
AMBRA1-210ENST00000531542 ZBTB42B2RXF5 422 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 BACH1O14867 736 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 USP11P51784 963 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 TTC3P53804 2025 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 AKAP17AQ02040 695 aaKnown RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 PAK2Q13177 524 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 BTG3Q14201 252 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 ZNF710Q8N1W2 664 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 CCDC148Q8NFR7 591 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 TRAPPC12Q8WVT3 735 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 LINC01599Q8WXQ3 324 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 ZBTB10Q96DT7 871 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-210ENST00000531542 GRXCR2A6NFK2 248 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 ATP4AP20648 1035 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 COL9A1P20849 921 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 KCNA5P22460 613 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 PDIA3P30101 505 aaKnown RBP15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 CTNNB1P35222 781 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 CTC1Q2NKJ3 1217 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 PDXDC2PQ6P474 469 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
AMBRA1-210ENST00000531542 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms