RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 PRRC2BQ5JSZ5 2229 aaKnown RBP25.32■■□□□ 1.64
TRAPPC4-210ENST00000531290 IGKV6D-21A0A0A0MT36 114 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 HBP1O60381 514 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 PDIA3P30101 505 aaKnown RBP25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 SETQ01105 290 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 TMEM62Q0P6H9 643 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 GPM6BQ13491 265 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 PDXDC2PQ6P474 469 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 CCDC148Q8NFR7 591 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 CRYGNQ8WXF5 182 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 MRPL38Q96DV4 380 aaKnown RBP25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 UIMC1Q96RL1 719 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 RNF26Q9BY78 433 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 ZNF302Q9NR11 478 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 TCEAL9Q9UHQ7 104 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 NID2Q14112 1375 aa25.31■■□□□ 1.64
TRAPPC4-210ENST00000531290 IGLV3-22A0A075B6J6 115 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 SMIM35A0A1B0GVV1 85 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 DHX15O43143 795 aaKnown RBP25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 EPB41L2O43491 1005 aaKnown RBP25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 PPFIA3O75145 1194 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 CD52P31358 61 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 CCT2P78371 535 aaKnown RBP25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 SWSAP1Q6NVH7 229 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 MTHFD1LQ6UB35 978 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 RUFY3Q7L099 469 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 ATP8B4Q8TF62 1192 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 NECAB3Q96P71 396 aaPredicted RBP25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 FTHL17Q9BXU8 183 aa25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 AGO3Q9H9G7 860 aaKnown RBP25.3■■□□□ 1.64
TRAPPC4-210ENST00000531290 H3BNC9 293 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 ADAMTS3O15072 1205 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 IFNAR1P17181 557 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 KLRC1P26715 233 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 NTRK3Q16288 839 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 CKAP2LQ8IYA6 745 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 CELF4Q9BZC1 486 aaKnown RBP25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 CYP46A1Q9Y6A2 500 aa25.29■■□□□ 1.64
TRAPPC4-210ENST00000531290 EVCP57679 992 aa25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 KRT76Q01546 638 aa25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 PRR16Q569H4 304 aa25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 CCDC60Q8IWA6 550 aaPredicted RBP25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 NCOA5Q9HCD5 579 aaKnown RBP25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 PADI3Q9ULW8 664 aa25.28■■□□□ 1.64
TRAPPC4-210ENST00000531290 PAK2Q13177 524 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 ZNF484Q5JVG2 852 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 ZNF746Q6NUN9 644 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 TRIM22Q8IYM9 498 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 RASGRP4Q8TDF6 673 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 UBE2ZQ9H832 354 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 VPS54Q9P1Q0 977 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 RWDD3Q9Y3V2 267 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 DOCK5Q9H7D0 1870 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 PTPRSQ13332 1948 aa25.27■■□□□ 1.64
TRAPPC4-210ENST00000531290 MUC3AQ02505 3323 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 RB1P06400 928 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 CIITAP33076 1130 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 CTNNB1P35222 781 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 NLRP5P59047 1200 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 BTG3Q14201 252 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 TIGD5Q53EQ6 642 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 SMAP1Q8IYB5 467 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 GINS2Q9Y248 185 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 IGSF9BQ9UPX0 1349 aa25.26■■□□□ 1.63
TRAPPC4-210ENST00000531290 CPLX1O14810 134 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 PSAPP07602 524 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 BMPR1AP36894 532 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 SSRP1Q08945 709 aaKnown RBP25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 BANK1Q8NDB2 785 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 SH3GLB2Q9NR46 395 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 SAMM50Q9Y512 469 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 PCDHA10Q9Y5I2 948 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 ADGRA3Q8IWK6 1321 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 KDM3AQ9Y4C1 1321 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 COL1A2P08123 1366 aa25.25■■□□□ 1.63
TRAPPC4-210ENST00000531290 REV3LO60673 3130 aa25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 TOB2Q14106 344 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 TRMT1LQ7Z2T5 733 aaKnown RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 RTN4RL1Q86UN2 441 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 KIAA0319LQ8IZA0 1049 aa25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 BBXQ8WY36 941 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 C11orf84Q9BUA3 381 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 MAFBQ9Y5Q3 323 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC4-210ENST00000531290 DGKIO75912 1065 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 STAG3L1P0CL83 205 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 ATP4AP20648 1035 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 KCNA5P22460 613 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 USP11P51784 963 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 NFX1Q12986 1120 aaKnown RBP25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 CPLX2Q6PUV4 134 aaKnown RBP25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 NPAS4Q8IUM7 802 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 LINC01599Q8WXQ3 324 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 ZNF689Q96CS4 500 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 ZNF274Q96GC6 653 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 TM6SF1Q9BZW5 370 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 GABBR1Q9UBS5 961 aa25.23■■□□□ 1.63
TRAPPC4-210ENST00000531290 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 TMEM266Q2M3C6 531 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms