RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 CHRNA1P02708 482 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 CYP3A7P24462 503 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN1-221ENST00000531068 Q4G0T1 1027 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 ZNF484Q5JVG2 852 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 MOXD1Q6UVY6 613 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 DNAJB3Q8WWF6 145 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 IFIH1Q9BYX4 1025 aaKnown RBP12.42□□□□□ -0.42
CAPN1-221ENST00000531068 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-221ENST00000531068 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-221ENST00000531068 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
CAPN1-221ENST00000531068 MAFBQ9Y5Q3 323 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-221ENST00000531068 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 WDR64B1ANS9 1081 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 M0R2N6 131 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 MSH4O15457 936 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 GAS7O60861 476 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 IGFBP4P22692 258 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 KLRC1P26715 233 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 SFNP31947 248 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 DEFB103AP81534 67 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 MRPS6P82932 125 aaKnown RBP12.41□□□□□ -0.42
CAPN1-221ENST00000531068 MTHFD1LQ6UB35 978 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 CCDC60Q8IWA6 550 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-221ENST00000531068 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-221ENST00000531068 LENG9Q96B70 501 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 FAM167AQ96KS9 214 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 NAP1L4Q99733 375 aaKnown RBP12.41□□□□□ -0.42
CAPN1-221ENST00000531068 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 TEKT3Q9BXF9 490 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 FAM49AQ9H0Q0 323 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-221ENST00000531068 DISC1Q9NRI5 854 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
CAPN1-221ENST00000531068 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
CAPN1-221ENST00000531068 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-221ENST00000531068 JAK3P52333 1124 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 TAP1Q03518 808 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 TCTN1Q2MV58 587 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 LRCH2Q5VUJ6 765 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPN1-221ENST00000531068 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPN1-221ENST00000531068 MYOCDQ8IZQ8 938 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 RDM1Q8NG50 284 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 KCNJ14Q9UNX9 436 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 CEP131Q9UPN4 1083 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 COL1A2P08123 1366 aa12.4□□□□□ -0.42
CAPN1-221ENST00000531068 MYH6P13533 1939 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 MAGEB2O15479 319 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 EDIL3O43854 480 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 GHRP10912 638 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 GCFC2P16383 781 aaKnown RBP12.39□□□□□ -0.43
CAPN1-221ENST00000531068 PTMSP20962 102 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 MGAT3Q09327 533 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 LPIN1Q14693 890 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 NPY5RQ15761 445 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 INF2Q27J81 1249 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 TSHZ1Q6ZSZ6 1077 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 ARNTL2Q8WYA1 636 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 MBOAT7Q96N66 472 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
CAPN1-221ENST00000531068 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
CAPN1-221ENST00000531068 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
CAPN1-221ENST00000531068 ENPP3O14638 875 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 MARCH6O60337 910 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 PSMD10O75832 226 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 ATP4AP20648 1035 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 TMOD1P28289 359 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 HTRA4P83105 476 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 TRIM29Q14134 588 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 FAM117BQ6P1L5 589 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 FAM20AQ96MK3 541 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms