RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 SNTG2Q9NY99 539 aa5.35□□□□□ -1.55
PTPRC-214ENST00000530727 UBR1Q8IWV7 1749 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 PPP1R12AO14974 1030 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-214ENST00000530727 SGSM2O43147 1006 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 ATF2P15336 505 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 SLC6A11P48066 632 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 TBX4P57082 545 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 FOXO4P98177 505 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 CCAR1Q8IX12 1150 aaKnown RBP5.34□□□□□ -1.55
PTPRC-214ENST00000530727 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 TESK2Q96S53 571 aa5.34□□□□□ -1.55
PTPRC-214ENST00000530727 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
PTPRC-214ENST00000530727 KIF7Q2M1P5 1343 aa5.34□□□□□ -1.56
PTPRC-214ENST00000530727 KDM2BQ8NHM5 1336 aa5.34□□□□□ -1.56
PTPRC-214ENST00000530727 SETD1AO15047 1707 aaKnown RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 MYO3AQ8NEV4 1616 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 BLACEA4D250 179 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 MSCO60682 206 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 DDX10Q13206 875 aaKnown RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 RSPO2Q6UXX9 243 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 MILR1Q7Z6M3 343 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 AMIGO3Q86WK7 504 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 DACT3Q96B18 629 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 SCAF11Q99590 1463 aaKnown RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 A0A0U1RQG5 324 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 FAM221BA6H8Z2 402 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 ADCY3O60266 1144 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 PDGFRBP09619 1106 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 BIRC2Q13490 618 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 NTRK3Q16288 839 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 PLEKHG4Q58EX7 1191 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 KCNT2Q6UVM3 1135 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-214ENST00000530727 EPB41L1Q9H4G0 881 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 PALD1Q9ULE6 856 aa5.33□□□□□ -1.56
PTPRC-214ENST00000530727 NLRP1Q9C000 1473 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 NRXN3Q9Y4C0 1643 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 ASXL1Q8IXJ9 1541 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 TNRQ92752 1358 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 DGKIO75912 1065 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 B3GNT8Q7Z7M8 397 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 SCUBE1Q8IWY4 988 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 SMARCC2Q8TAQ2 1214 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 CPA5Q8WXQ8 436 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
PTPRC-214ENST00000530727 SETD1BQ9UPS6 1966 aaKnown RBP5.32□□□□□ -1.56
PTPRC-214ENST00000530727 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 CACNB2Q08289 660 aaPredicted RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 VMACQ2NL98 169 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 STYK1Q6J9G0 422 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 MKL1Q969V6 931 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 ZFYVE21Q9BQ24 234 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 UBA5Q9GZZ9 404 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 TERF2IPQ9NYB0 399 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 PPARGC1AQ9UBK2 798 aaKnown RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 ZNF652Q9Y2D9 606 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 PRKAB1Q9Y478 270 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 RIMS1Q86UR5 1692 aaKnown RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 ARHGEF28Q8N1W1 1705 aaKnown RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 ALKQ9UM73 1620 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 PTPRMP28827 1452 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 FAM153BP0C7A2 387 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 PAX3P23760 479 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 GRK2P25098 689 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 GRK3P35626 688 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 RHBDL3P58872 404 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 GPR85P60893 370 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 SUMO1P63165 101 aaKnown RBP5.31□□□□□ -1.56
PTPRC-214ENST00000530727 FAM209AQ5JX71 171 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 FOXB2Q5VYV0 432 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 TSHZ1Q6ZSZ6 1077 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 IFNL3Q8IZI9 196 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 RPS6KC1Q96S38 1066 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 DNAJC7Q99615 494 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 JAM3Q9BX67 310 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 KANSL2Q9H9L4 492 aa5.31□□□□□ -1.56
PTPRC-214ENST00000530727 DISP3Q9P2K9 1392 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 RIMS2Q9UQ26 1411 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 ARHGAP23Q9P227 1491 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 ARID1BQ8NFD5 2236 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 SLIT1O75093 1534 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 KRIT1O00522 736 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PRC1O43663 620 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PPFIA4O75335 1185 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PLA2G1BP04054 148 aaKnown RBP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 CYP2C8P10632 490 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms