RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 PPFIA3O75145 1194 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 IGBP1P78318 339 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 RBM10P98175 930 aaKnown RBP18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 TROAPQ12815 778 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 PAK2Q13177 524 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 USP17L6PQ6QN14 398 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
PACSIN3-206ENST00000530405 FNDC1Q4ZHG4 1894 aaPredicted RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 KDM3AQ9Y4C1 1321 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 GALR2O43603 387 aaPredicted RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 SRGAP2BP0DMP2 458 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 INSRRP14616 1297 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 SARSP49591 514 aaKnown RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 GATMP50440 423 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 KCNC3Q14003 757 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 TNPO1Q92973 898 aaKnown RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 ZBTB10Q96DT7 871 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 CELF4Q9BZC1 486 aaKnown RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 S1PR5Q9H228 398 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 TMX1Q9H3N1 280 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 PCDHA2Q9Y5H9 948 aa18.77■□□□□ 0.6
PACSIN3-206ENST00000530405 VPS13AQ96RL7 3174 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 FGF18O76093 207 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 ITGB5P18084 799 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 ERVFC1P60507 584 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 TRDNQ13061 729 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 ZBTB33Q86T24 672 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 RASGRP4Q8TDF6 673 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 PCDHB7Q9Y5E2 793 aa18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 RIF1Q5UIP0 2472 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-206ENST00000530405 ERICH2A1L162 156 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 IFIT3O14879 490 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 FSCN2O14926 492 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 PDGFBP01127 241 aaPredicted RBP18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 TMEM62Q0P6H9 643 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 MTMR1Q13613 665 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 SPOUT1Q5T280 376 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 ANKRD54Q6NXT1 300 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 ASCL5Q7RTU5 278 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 PLEKHM2Q8IWE5 1019 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 NME8Q8N427 588 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 SENP2Q9HC62 589 aa18.75■□□□□ 0.59
PACSIN3-206ENST00000530405 MAFGO15525 162 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 HOXB8P17481 243 aaPredicted RBP18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 NBL1P41271 181 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 KRT76Q01546 638 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 UBALD2Q8IYN6 164 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 PCYT2Q99447 389 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 SPZ1Q9BXG8 430 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 AZI2Q9H6S1 392 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 TMEM260Q9NX78 707 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 LZTS1Q9Y250 596 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 UBIAD1Q9Y5Z9 338 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 FAM186AA6NE01 2351 aa18.74■□□□□ 0.59
PACSIN3-206ENST00000530405 SMIM35A0A1B0GVV1 85 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 PRR23AA6NEV1 266 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 TBKBP1A7MCY6 615 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 TECP42680 631 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 WTAPQ15007 396 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 COLGALT1Q8NBJ5 622 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 KREMEN2Q8NCW0 462 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 C1orf112Q9NSG2 853 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 TRPC6Q9Y210 931 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 NR2E1Q9Y466 385 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 DCHS1Q96JQ0 3298 aa18.73■□□□□ 0.59
PACSIN3-206ENST00000530405 MGEA5O60502 916 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 NFX1Q12986 1120 aaKnown RBP18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 MTMR3Q13615 1198 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 SART3Q15020 963 aaKnown RBP18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 SLC24A5Q71RS6 500 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 PLPPR4Q7Z2D5 763 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 MAP3K14Q99558 947 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 ERVK-5Q9HDB9 667 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 JPH1Q9HDC5 661 aaPredicted RBP18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 JADE2Q9NQC1 790 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 TYW1Q9NV66 732 aaKnown RBP18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 PKD2L1Q9P0L9 805 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 SORCS3Q9UPU3 1222 aa18.72■□□□□ 0.59
PACSIN3-206ENST00000530405 C9IYK1 514 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 LAG3P18627 525 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 PLCB4Q15147 1175 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 ODR4Q5SWX8 454 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 ERMP1Q7Z2K6 904 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 TRAPPC12Q8WVT3 735 aa18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 MRPS27Q92552 414 aaKnown RBP18.71■□□□□ 0.59
PACSIN3-206ENST00000530405 ADAM2Q99965 735 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms