RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 VTA1Q9NP79 307 aa8.15□□□□□ -1.1
CASP4-208ENST00000530309 NOC2LQ9Y3T9 749 aaKnown RBP8.15□□□□□ -1.1
CASP4-208ENST00000530309 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 K7ESF4 209 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 N4BP3O15049 544 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 CYP2C8P10632 490 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 PFKPQ01813 784 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 VASNQ6EMK4 673 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 IGDCC3Q8IVU1 814 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 SMARCC2Q8TAQ2 1214 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
CASP4-208ENST00000530309 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
CASP4-208ENST00000530309 AHCYL2Q96HN2 611 aaKnown RBP8.14□□□□□ -1.11
CASP4-208ENST00000530309 SGPP1Q9BX95 441 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 ZDHHC5Q9C0B5 715 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 PCDH18Q9HCL0 1135 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 RBPJLQ9UBG7 517 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 FAN1Q9Y2M0 1017 aa8.14□□□□□ -1.11
CASP4-208ENST00000530309 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 ZNF839A8K0R7 811 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 PTGS1P23219 599 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
CASP4-208ENST00000530309 PRAMEF18Q5VWM3 479 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 LIPIQ6XZB0 460 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 FRMD7Q6ZUT3 714 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 RTN4RL1Q86UN2 441 aaPredicted RBP8.13□□□□□ -1.11
CASP4-208ENST00000530309 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 E2F7Q96AV8 911 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 MTMR8Q96EF0 704 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 ASPSCR1Q9BZE9 553 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 CCDC8Q9H0W5 538 aaPredicted RBP8.13□□□□□ -1.11
CASP4-208ENST00000530309 MS4A5Q9H3V2 200 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 GCM1Q9NP62 436 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 SLC39A2Q9NP94 309 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 USP36Q9P275 1121 aaKnown RBP8.13□□□□□ -1.11
CASP4-208ENST00000530309 WASF3Q9UPY6 502 aa8.13□□□□□ -1.11
CASP4-208ENST00000530309 TMEM253P0C7T8 217 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 EPHB3P54753 998 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 ERVK-21P61565 698 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 SYDE2Q5VT97 1194 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 MCTP1Q6DN14 999 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 TMC5Q6UXY8 1006 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 IGDCC4Q8TDY8 1250 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 KCNN1Q92952 543 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 ZNF496Q96IT1 587 aaPredicted RBP8.12□□□□□ -1.11
CASP4-208ENST00000530309 TMEM209Q96SK2 561 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 TOPORSQ9NS56 1045 aaPredicted RBP8.12□□□□□ -1.11
CASP4-208ENST00000530309 UCKL1Q9NWZ5 548 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 MSRAQ9UJ68 235 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 TRHDEQ9UKU6 1024 aa8.12□□□□□ -1.11
CASP4-208ENST00000530309 UBA6A0AVT1 1052 aaPredicted RBP8.11□□□□□ -1.11
CASP4-208ENST00000530309 KDM1AO60341 852 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 MC4RP32245 332 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 THBS2P35442 1172 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 DLG4P78352 724 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 RGL3Q3MIN7 710 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 TTC38Q5R3I4 469 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 PHYKPLQ8IUZ5 450 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 C7orf31Q8N865 590 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 DTX3Q8N9I9 347 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
CASP4-208ENST00000530309 INCENPQ9NQS7 918 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 DLL4Q9NR61 685 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 C14orf119Q9NWQ9 140 aa8.11□□□□□ -1.11
CASP4-208ENST00000530309 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 NFIBO00712 420 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 MPIG6BO95866 241 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 S100BP04271 92 aaPredicted RBP8.1□□□□□ -1.11
CASP4-208ENST00000530309 ITGA1P56199 1179 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 FOXO4P98177 505 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 SKIDA1Q1XH10 827 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 TIGD7Q6NT04 549 aaPredicted RBP8.1□□□□□ -1.11
CASP4-208ENST00000530309 TUBGCP5Q96RT8 1024 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 FOXB1Q99853 325 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 SYT3Q9BQG1 590 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 GORASP1Q9BQQ3 440 aa8.1□□□□□ -1.11
CASP4-208ENST00000530309 GABRDO14764 452 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 ALDH6A1Q02252 535 aaKnown RBP8.09□□□□□ -1.11
CASP4-208ENST00000530309 KLF1Q13351 362 aaPredicted RBP8.09□□□□□ -1.11
CASP4-208ENST00000530309 ODR4Q5SWX8 454 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 MAML3Q96JK9 1138 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 AMNQ9BXJ7 453 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 GALNT8Q9NY28 637 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 KCNG1Q9UIX4 513 aa8.09□□□□□ -1.11
CASP4-208ENST00000530309 ALDH1L1O75891 902 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 PRLP01236 227 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 SCAND1P57086 179 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 SLC6A3Q01959 620 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 ROM1Q03395 351 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 PDCD1Q15116 288 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 INAVAQ3KP66 663 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 ESPNLQ6ZVH7 1005 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 CBARPQ8N350 705 aaPredicted RBP8.08□□□□□ -1.12
CASP4-208ENST00000530309 LINC00482Q8N8I6 264 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 CALML6Q8TD86 181 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 C11orf84Q9BUA3 381 aaPredicted RBP8.08□□□□□ -1.12
CASP4-208ENST00000530309 SEMA4AQ9H3S1 761 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 POFUT1Q9H488 388 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 ARHGAP20Q9P2F6 1191 aa8.08□□□□□ -1.12
CASP4-208ENST00000530309 SPEF1Q9Y4P9 236 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms