RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 CUTAO60888 179 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 POLD1P28340 1107 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 MC4RP32245 332 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 CSF2RBP32927 897 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 C2orf69Q8N8R5 385 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 DLG3Q92796 817 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 LOXL4Q96JB6 756 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 KANSL2Q9H9L4 492 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 B3GALT1Q9Y5Z6 326 aa6.89□□□□□ -1.31
USP47-209ENST00000530041 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 B4E1Z4 1266 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 MPIG6BO95866 241 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 SDHAP31040 664 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 IGFALSP35858 605 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 IL13RA1P78552 427 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 USP10Q14694 798 aaKnown RBP6.88□□□□□ -1.31
USP47-209ENST00000530041 STILQ15468 1287 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 SLFN13Q68D06 897 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 CXXC5Q7LFL8 322 aaKnown RBP6.88□□□□□ -1.31
USP47-209ENST00000530041 WNK4Q96J92 1243 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 JADE2Q9NQC1 790 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
USP47-209ENST00000530041 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 FOXP2O15409 715 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 HIP1RO75146 1068 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 ASLP04424 464 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 MMEP08473 750 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 ADAM17P78536 824 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 TOP3AQ13472 1001 aaPredicted RBP6.87□□□□□ -1.31
USP47-209ENST00000530041 WDR72Q3MJ13 1102 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 ZCCHC8Q6NZY4 707 aaKnown RBP6.87□□□□□ -1.31
USP47-209ENST00000530041 DBX2Q6ZNG2 339 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 OTOP1Q7RTM1 612 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 DDX53Q86TM3 631 aaKnown RBP6.87□□□□□ -1.31
USP47-209ENST00000530041 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 ASB15Q8WXK1 588 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 BTBD2Q9BX70 525 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 AMNQ9BXJ7 453 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 CARD11Q9BXL7 1154 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 UCKL1Q9NWZ5 548 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 SLC4A7Q9Y6M7 1214 aa6.87□□□□□ -1.31
USP47-209ENST00000530041 GPR42O15529 346 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 DNAJC8O75937 253 aaPredicted RBP6.86□□□□□ -1.31
USP47-209ENST00000530041 CNOT4O95628 575 aaKnown RBP6.86□□□□□ -1.31
USP47-209ENST00000530041 ZBTB48P10074 688 aaPredicted RBP6.86□□□□□ -1.31
USP47-209ENST00000530041 ECE1P42892 770 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 MECP2P51608 486 aaKnown RBP6.86□□□□□ -1.31
USP47-209ENST00000530041 IRF9Q00978 393 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 ARHGAP44Q17R89 818 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 BORCS6Q96GS4 357 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 GBP4Q96PP9 640 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 PTPN18Q99952 460 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 BOCQ9BWV1 1114 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 PIF1Q9H611 641 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 SEC61A2Q9H9S3 476 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 SAMD15Q9P1V8 674 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 FBXO10Q9UK96 956 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 ASB1Q9Y576 335 aa6.86□□□□□ -1.31
USP47-209ENST00000530041 RASSF10A6NK89 507 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 M0R2C6 588 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 PPP1R12AO14974 1030 aaPredicted RBP6.85□□□□□ -1.31
USP47-209ENST00000530041 RFPL3O75679 317 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 ZNF888P0CJ79 500 aaPredicted RBP6.85□□□□□ -1.31
USP47-209ENST00000530041 ETV4P43268 484 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 TMEM132BQ14DG7 1078 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 CIR1Q86X95 450 aaPredicted RBP6.85□□□□□ -1.31
USP47-209ENST00000530041 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 HIPK4Q8NE63 616 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 CHST13Q8NET6 341 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 C8orf49Q96NF6 230 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 PTPN22Q9Y2R2 807 aa6.85□□□□□ -1.31
USP47-209ENST00000530041 TNPO3Q9Y5L0 923 aaKnown RBP6.85□□□□□ -1.31
USP47-209ENST00000530041 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 OPA1O60313 960 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 GLRX3O76003 335 aaKnown RBP6.84□□□□□ -1.31
USP47-209ENST00000530041 ASMTLO95671 621 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 KANK2Q63ZY3 851 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 CC2D1AQ6P1N0 951 aaPredicted RBP6.84□□□□□ -1.31
USP47-209ENST00000530041 LRSAM1Q6UWE0 723 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 WDR48Q8TAF3 677 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 GPR20Q99678 358 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 OR10A5Q9H207 317 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
USP47-209ENST00000530041 PRAMEF22A3QJZ6 481 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 PABPC4Q13310 644 aaKnown RBP eCLIP6.83□□□□□ -1.32
USP47-209ENST00000530041 ZNF460Q14592 562 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 ZNF568Q3ZCX4 644 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 CHST14Q8NCH0 376 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 SCYL1Q96KG9 808 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms