RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 OLFML2BQ68BL8 750 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 RNF207Q6ZRF8 634 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 DHX40Q8IX18 779 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 KCTD6Q8NC69 237 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 UPF3AQ9H1J1 476 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 NDE1Q9NXR1 346 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 TSPOAP1O95153 1857 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 LAMC1P11047 1609 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF185O15231 689 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ZBED4O75132 1171 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 DMP1Q13316 513 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 MDH1BQ5I0G3 518 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 CENPUQ71F23 418 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 KIAA2013Q8IYS2 634 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 TBCKQ8TEA7 893 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 COG1Q8WTW3 980 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ADAM33Q9BZ11 813 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ALG13Q9NP73 1137 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ANGPTL3Q9Y5C1 460 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 IQANK1A0A1B0GTG1 560 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 COPEO14579 308 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 PRKAB2O43741 272 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 PRR29P0C7W0 189 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ALAS1P13196 640 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 NOP14P78316 857 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 DEUP1Q05D60 604 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 RAB44Q7Z6P3 723 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 IL17REQ8NFR9 667 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF473Q8WTR7 871 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 CCDC124Q96CT7 223 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 USP40Q9NVE5 1235 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 RNF17Q9BXT8 1623 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 METP08581 1390 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 LRRC53A6NM62 1247 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 KDM1AO60341 852 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 HSPA6P17066 643 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 CYTH1Q15438 398 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 GLE1Q53GS7 698 aaKnown RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 SLC30A9Q6PML9 568 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 PDZD4Q76G19 769 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-223ENST00000529986 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 CDC26Q8NHZ8 85 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ING2Q9H160 280 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 ZWILCHQ9H900 591 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CTNND1-223ENST00000529986 GLI2P10070 1586 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 PALM3A6NDB9 673 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ATXN8OSP0DMR3 200 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 STAT2P52630 851 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 CTSWP56202 376 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 AP2B1P63010 937 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 AOC3Q16853 763 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 TRIM67Q6ZTA4 783 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ORAI2Q96SN7 254 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 OSBPL5Q9H0X9 879 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 CUEDC2Q9H467 287 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 MAGEF1Q9HAY2 307 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 DDX28Q9NUL7 540 aaKnown RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 TMOD4Q9NZQ9 345 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 FBXL5Q9UKA1 691 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 STRIP2Q9ULQ0 834 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 APOBEC2Q9Y235 224 aaKnown RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ZDHHC9Q9Y397 364 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 QRICH2Q9H0J4 1663 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 SEC24DO94855 1032 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 KIF19Q2TAC6 998 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGEF16Q5VV41 709 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 PRMT1Q99873 361 aaKnown RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 CD248Q9HCU0 757 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 SYCE1LA8MT33 242 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 PHF20L1A8MW92 1017 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 H3BRJ5 948 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ATP5HO75947 161 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ZFXP17010 805 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 CD58P19256 250 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 SKOR1P84550 965 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 IQCB1Q15051 598 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 MUM1L1Q5H9M0 696 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 DNAJC24Q6P3W2 148 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 FBXL13Q8NEE6 735 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 SNRNP27Q8WVK2 155 aaKnown RBP8.19□□□□□ -1.1
CTNND1-223ENST00000529986 FAM149B1Q96BN6 582 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 LRRC1Q9BTT6 524 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ABCF3Q9NUQ8 709 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 TRAF3IP3Q9Y228 551 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 NOD1Q9Y239 953 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 PCDHA1Q9Y5I3 950 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 GJA3Q9Y6H8 435 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGAP31Q2M1Z3 1444 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 GOLGA8IPA6NC78 632 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 GOLGA8JA6NMD2 632 aa8.19□□□□□ -1.1
CTNND1-223ENST00000529986 CCDC188H7C350 402 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms