RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	ABL1	P00519	1130 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	NR3C1	P04150	777 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	P4HB	P07237	508 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	XRCC5	P13010	732 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	ZSCAN20	P17040	1043 aa	Predicted RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	PSMC2	P35998	433 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	GPS2	Q13227	327 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	DALRD3	Q5D0E6	543 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	PCNX4	Q63HM2	1172 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	HGSNAT	Q68CP4	663 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	CCDC70	Q6NSX1	233 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	CCDC174	Q6PII3	467 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	HDX	Q7Z353	690 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	TPH2	Q8IWU9	490 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	NELFCD	Q8IXH7	590 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	CYP2W1	Q8TAV3	490 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	DYDC2	Q96IM9	177 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	LSM14B	Q9BX40	385 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	UBXN6	Q9BZV1	441 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	TMEM39B	Q9GZU3	492 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	ZHX3	Q9H4I2	956 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	TBC1D22B	Q9NU19	505 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	DMAC2	Q9NW81	257 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	TBC1D7	Q9P0N9	293 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	PUF60	Q9UHX1	559 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	DBR1	Q9UK59	544 aa	Known RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	FRMPD4	Q14CM0	1322 aa		11.76	□□□□□ -0.53
PUF60-213	ENST00000528999	RCCD1	A6NED2	376 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	IPO5	O00410	1097 aa	Known RBP	11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	MAP2K7	O14733	419 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	ZNF263	O14978	683 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	EPHB6	O15197	1021 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	MAFG	O15525	162 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	ZBED4	O75132	1171 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	HOXD13	P35453	343 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	PRKCI	P41743	596 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	MCCD1	P59942	119 aa	Predicted RBP	11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	RASA3	Q14644	834 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	PPP2R5A	Q15172	486 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	SLC18A3	Q16572	532 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	IFI16	Q16666	785 aa	Known RBP	11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	MAP9	Q49MG5	647 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	KLHDC7A	Q5VTJ3	777 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	GBP6	Q6ZN66	633 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	HS2ST1	Q7LGA3	356 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	ZNF720	Q7Z2F6	126 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	CCDC125	Q86Z20	511 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	MYCT1	Q8N699	235 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	RDM1	Q8NG50	284 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	CLEC4D	Q8WXI8	215 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	TBC1D5	Q92609	795 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	BORCS6	Q96GS4	357 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	NOX5	Q96PH1	765 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	RUSC1	Q9BVN2	902 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	FGFBP2	Q9BYJ0	223 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	GAN	Q9H2C0	597 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	TAOK3	Q9H2K8	898 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	ZSWIM4	Q9H7M6	989 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	ANKZF1	Q9H8Y5	726 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	SLC38A10	Q9HBR0	1119 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	JADE2	Q9NQC1	790 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	RGL1	Q9NZL6	768 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	RGS17	Q9UGC6	210 aa	Predicted RBP	11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	INTU	Q9ULD6	942 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	CCPG1	Q9ULG6	757 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	SNX12	Q9UMY4	172 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	UBIAD1	Q9Y5Z9	338 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	LTBP3	Q9NS15	1303 aa		11.75	□□□□□ -0.53
PUF60-213	ENST00000528999	KIF13B	Q9NQT8	1826 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	CES2	O00748	559 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	PRPF6	O94906	941 aa	Known RBP	11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	GCNT3	O95395	438 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	ATP1A1	P05023	1023 aa	Known RBP	11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	CCDC172	P0C7W6	258 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	MYB	P10242	640 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	INPP5B	P32019	993 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	POLR2F	P61218	127 aa	Known RBP	11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	CYP27A1	Q02318	531 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	NAB2	Q15742	525 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	ASIC2	Q16515	512 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	EXOC3L4	Q17RC7	722 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	LONRF2	Q1L5Z9	754 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	DCAF15	Q66K64	600 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	DPY19L2P1	Q6NXN4	242 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	POTEA	Q6S8J7	498 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	MIGA2	Q7L4E1	593 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	C12orf56	Q8IXR9	622 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	MMGT1	Q8N4V1	131 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	CALR3	Q96L12	384 aa	Known RBP	11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	TEPSIN	Q96N21	525 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	IWS1	Q96ST2	819 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	STRA6	Q9BX79	667 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	FUT8	Q9BYC5	575 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	ZNF341	Q9BYN7	854 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	ACBD3	Q9H3P7	528 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	UNC45A	Q9H3U1	944 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	ST6GALNAC4	Q9H4F1	302 aa		11.74	□□□□□ -0.53
PUF60-213	ENST00000528999	TMEM206	Q9H813	350 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms