RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 GRK2P25098 689 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 GRK3P35626 688 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 MECP2P51608 486 aaKnown RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 LACTBP83111 547 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 SMAD4Q13485 552 aaKnown RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 PWP2Q15269 919 aaKnown RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 INAVAQ3KP66 663 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 MBLAC2Q68D91 279 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CCSAPQ6IQ19 270 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 FRMD5Q7Z6J6 570 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 ZBTB46Q86UZ6 589 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 OSTM1Q86WC4 334 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CCAR1Q8IX12 1150 aaKnown RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CBARPQ8N350 705 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 LZTR1Q8N653 840 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CHST14Q8NCH0 376 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 SMARCC2Q8TAQ2 1214 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 COG1Q8WTW3 980 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CAMKK2Q96RR4 588 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 SMAD5Q99717 465 aaKnown RBP4.31□□□□□ -1.72
BRCA2-203ENST00000528762 MENTQ9BUN1 341 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 JAM3Q9BX67 310 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 SPTLC3Q9NUV7 552 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 BTG4Q9NY30 223 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 CLDND1Q9NY35 253 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 ZIM2Q9NZV7 527 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 DUSP10Q9Y6W6 482 aa4.31□□□□□ -1.72
BRCA2-203ENST00000528762 TNKSO95271 1327 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 H7BY64 318 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 FZD9O00144 591 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 TPD52L2O43399 206 aaKnown RBP4.3□□□□□ -1.72
BRCA2-203ENST00000528762 PRKD3O94806 890 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 ABLIM3O94929 683 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 FBXO21O94952 628 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 CNR2P34972 360 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 DLX2Q07687 328 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-203ENST00000528762 PIN1Q13526 163 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-203ENST00000528762 RGL3Q3MIN7 710 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 CREB3L3Q68CJ9 461 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 STK32CQ86UX6 486 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 MYO1HQ8N1T3 1032 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 DPF3Q92784 378 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 PMM1Q92871 262 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 CHMP4CQ96CF2 233 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 HOOK2Q96ED9 719 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 DDX11Q96FC9 970 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 TRMT2BQ96GJ1 504 aaKnown RBP4.3□□□□□ -1.72
BRCA2-203ENST00000528762 TMEM169Q96HH4 297 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 PCGF6Q9BYE7 350 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 CDIP1Q9H305 208 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 EMC7Q9NPA0 242 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 OXSMQ9NWU1 459 aa4.3□□□□□ -1.72
BRCA2-203ENST00000528762 PPARGC1AQ9UBK2 798 aaKnown RBP4.3□□□□□ -1.72
BRCA2-203ENST00000528762 SLC12A8A0AV02 714 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 PEX14O75381 377 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 FUCA1P04066 466 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 NTRK1P04629 796 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 NCAM1P13591 858 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 INSRRP14616 1297 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 PDE6AP16499 860 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 SESN3P58005 492 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 ERVK-21P61565 698 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 HTRA3P83110 453 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 RBM10P98175 930 aaKnown RBP4.29□□□□□ -1.72
BRCA2-203ENST00000528762 SPIRE1Q08AE8 756 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 ZNF174Q15697 407 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 GPR19Q15760 415 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 PTPN21Q16825 1174 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 MAP9Q49MG5 647 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 NXNQ6DKJ4 435 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 EP400NLQ6ZTU2 488 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 OTOP1Q7RTM1 612 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 HDGFL2Q7Z4V5 671 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-203ENST00000528762 B3GNT8Q7Z7M8 397 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 C14orf80Q86SX3 495 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 SAPCD2Q86UD0 394 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 CISD2Q8N5K1 135 aaKnown RBP4.29□□□□□ -1.72
BRCA2-203ENST00000528762 NLGN2Q8NFZ4 835 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 AHCYL2Q96HN2 611 aaKnown RBP4.29□□□□□ -1.72
BRCA2-203ENST00000528762 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 RHOBTB2Q9BYZ6 727 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 CBLCQ9ULV8 474 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 ZNF652Q9Y2D9 606 aa4.29□□□□□ -1.72
BRCA2-203ENST00000528762 H7C1D1 291 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 PRPF3O43395 683 aaKnown RBP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 KRT37O76014 449 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 ADRB1P08588 477 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 ZBTB48P10074 688 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 MYBL2P10244 700 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 GNAT1P11488 350 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 COL6A2P12110 1019 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 ZSCAN20P17040 1043 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 KRT15P19012 456 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 JAM2P57087 298 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 CORO7P57737 925 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 RHBDL3P58872 404 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms