RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 APBB2Q92870 758 aa13.17□□□□□ -0.3
SRPRA-203ENST00000528744 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-203ENST00000528744 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
SRPRA-203ENST00000528744 NCOA5Q9HCD5 579 aaKnown RBP13.17□□□□□ -0.3
SRPRA-203ENST00000528744 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
SRPRA-203ENST00000528744 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 GRM6O15303 877 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
SRPRA-203ENST00000528744 KLRC1P26715 233 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 GATMP50440 423 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 RCAN1P53805 252 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 CAMK1Q14012 370 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
SRPRA-203ENST00000528744 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 KIAA0319LQ8IZA0 1049 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 GJA10Q969M2 543 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 LENG9Q96B70 501 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
SRPRA-203ENST00000528744 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
SRPRA-203ENST00000528744 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 MGEA5O60502 916 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 ZNF76P36508 570 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 BMPR1AP36894 532 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 EVCP57679 992 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 TSHZ1Q6ZSZ6 1077 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
SRPRA-203ENST00000528744 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
SRPRA-203ENST00000528744 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 MRPL38Q96DV4 380 aaKnown RBP13.15□□□□□ -0.3
SRPRA-203ENST00000528744 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
SRPRA-203ENST00000528744 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 TRPV2Q9Y5S1 764 aa13.15□□□□□ -0.3
SRPRA-203ENST00000528744 MICAL3Q7RTP6 2002 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
SRPRA-203ENST00000528744 DGKIO75912 1065 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 IL9P15248 144 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 KCNA5P22460 613 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 DNAJB1P25685 340 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 CIITAP33076 1130 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 LTBRP36941 435 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 ATP8B4Q8TF62 1192 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
SRPRA-203ENST00000528744 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
SRPRA-203ENST00000528744 MAFBQ9Y5Q3 323 aaPredicted RBP13.14□□□□□ -0.31
SRPRA-203ENST00000528744 NID2Q14112 1375 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
SRPRA-203ENST00000528744 HBP1O60381 514 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 IFNAR1P17181 557 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 COL9A1P20849 921 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRPRA-203ENST00000528744 FGD1P98174 961 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 DLX2Q07687 328 aaPredicted RBP13.13□□□□□ -0.31
SRPRA-203ENST00000528744 NPY5RQ15761 445 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 LEXMQ3ZCV2 418 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 PRR16Q569H4 304 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 IER5Q5VY09 327 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 NEK9Q8TD19 979 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
SRPRA-203ENST00000528744 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
SRPRA-203ENST00000528744 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
SRPRA-203ENST00000528744 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 CCDC196A0A1B0GTZ2 297 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 BACH1O14867 736 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 MSH4O15457 936 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF862O60290 1169 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 CSPG5O95196 566 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 CTNNB1P35222 781 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 KRT76Q01546 638 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 SAMD11Q96NU1 681 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms