RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 PRPHP41219 470 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 PLTPP55058 493 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 UBXN2AP68543 259 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 ITGB3BPQ13352 177 aaPredicted RBP10.77□□□□□ -0.69
SF3B2-206ENST00000528302 SBK1Q52WX2 424 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 MFSD14BQ5SR56 506 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 MEI1Q5TIA1 1274 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 CCDC91Q7Z6B0 441 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.69
SF3B2-206ENST00000528302 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 SNX24Q9Y343 169 aa10.77□□□□□ -0.69
SF3B2-206ENST00000528302 EDIL3O43854 480 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 ZNF844Q08AG5 666 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 FAM133BQ5BKY9 247 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 FIGNQ5HY92 759 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 KDM7AQ6ZMT4 941 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 GLYCTKQ8IVS8 523 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 PIGOQ8TEQ8 1089 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 KLC4Q9NSK0 619 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 DDX20Q9UHI6 824 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 BAIAP2L1Q9UHR4 511 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 ZBTB39O15060 712 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CETN3O15182 167 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 GCNT3O95395 438 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SHBGP04278 402 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CDK17Q00537 523 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 LRRC14Q15048 493 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 ZNF746Q6NUN9 644 aaPredicted RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SFR1Q86XK3 245 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 GIMAP7Q8NHV1 300 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 DNAJC19Q96DA6 116 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 MTMR9Q96QG7 549 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SH2D3AQ9BRG2 576 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SLC40A1Q9NP59 571 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 NARFQ9UHQ1 456 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SH3BP1Q9Y3L3 701 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 DNM1LO00429 736 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CTNND1O60716 968 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 HNRNPH3P31942 346 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 SKOR1P84550 965 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 EXOC3L4Q17RC7 722 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 TRAPPC3LQ5T215 181 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 MICALCLQ6ZW33 695 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CCDC65Q8IXS2 484 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 ADGRF4Q8IZF3 695 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 TCP11Q8WWU5 503 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 HAS1Q92839 578 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 CXorf56Q9H5V9 222 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 PKD2L1Q9P0L9 805 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 ARMCX3Q9UH62 379 aaPredicted RBP10.76□□□□□ -0.69
SF3B2-206ENST00000528302 PPME1Q9Y570 386 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
SF3B2-206ENST00000528302 TPD52L2O43399 206 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PPP1R11O60927 126 aaPredicted RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 MED24O75448 989 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 UCHL3P15374 230 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PRLRP16471 622 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 IRF5Q13568 498 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 ZNF662Q6ZS27 426 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 RAPGEF5Q92565 580 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 THOC1Q96FV9 657 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PSTPIP2Q9H939 334 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 GMNCA6NCL1 334 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CAND2O75155 1236 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 VIMP08670 466 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CLTAP09496 248 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CYP2J2P51589 502 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 GTF2IP78347 998 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PPP1R7Q15435 360 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 RINLQ6ZS11 566 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CYP2W1Q8TAV3 490 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 OSBPL7Q9BZF2 842 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 TMBIM4Q9HC24 238 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 LRRC4BQ9NT99 713 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 RGL1Q9NZL6 768 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 SSU72P8A0A1W2PR75 194 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 PGRMC1O00264 195 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CPP00450 1065 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 FNTAP49354 379 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 ZC2HC1CQ53FD0 456 aaPredicted RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 CLEC4GQ6UXB4 293 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms