RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 MYOCDQ8IZQ8 938 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ANKRD35Q8N283 1001 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 FLCNQ8NFG4 579 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 RUBCNQ92622 972 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 TSR2Q969E8 191 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 SNX21Q969T3 373 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 NSUN4Q96CB9 384 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 VWCEQ96DN2 955 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 YME1L1Q96TA2 773 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ZCCHC2Q9C0B9 1178 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 UPF2Q9HAU5 1272 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 SERPINB13Q9UIV8 391 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 MKL2Q9ULH7 1088 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 PCDHGC4Q9Y5F7 938 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 MYH4Q9Y623 1939 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 CACNA1HO95180 2353 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 RALGAPA1Q6GYQ0 2036 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SCN10AQ9Y5Y9 1956 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 GRIN2DO15399 1336 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 E9PSI1 815 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 CTAGE5O15320 804 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 TBX10O75333 385 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 PARNO95453 639 aaKnown RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 IGHDP01880 384 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 PROCP04070 461 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 ADRB1P08588 477 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 NBPF7P0C2Y1 421 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 HOXB4P17483 251 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 CTNNB1P35222 781 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 NKX3-2P78367 333 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 MVPQ14764 893 aaKnown RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 CBX2Q14781 532 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 COL19A1Q14993 1142 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SEPT2Q15019 361 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SKOR2Q2VWA4 1001 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 RABL6Q3YEC7 729 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 SNRNP48Q6IEG0 339 aaKnown RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 NAA16Q6N069 864 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 KIAA1211Q6ZU35 1233 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 TTC6Q86TZ1 520 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 FBXO11Q86XK2 927 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 TMEM192Q8IY95 271 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 CCDC144CPQ8IYA2 1237 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 UBALD2Q8IYN6 164 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SPICE1Q8N0Z3 855 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 STAG2Q8N3U4 1231 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 CAGE1Q8TC20 777 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 AFAP1L1Q8TED9 768 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SECISBP2LQ93073 1101 aaKnown RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 PDLIM2Q96JY6 352 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 C2orf49Q9BVC5 232 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 LMAN2LQ9H0V9 348 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 SLKQ9H2G2 1235 aaPredicted RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 NCDNQ9UBB6 729 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 ZMIZ1Q9ULJ6 1067 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 TPRP12270 2363 aaKnown RBP4.8□□□□□ -1.64
CHD7-205ENST00000527825 MYO7AQ13402 2215 aa4.8□□□□□ -1.64
CHD7-205ENST00000527825 RAD50Q92878 1312 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ACACBO00763 2458 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 DCDC2BA2VCK2 349 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ASB14A6NK59 587 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 PRR5-ARHGAP8B1AHC4 643 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 WDR46O15213 610 aaKnown RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 ATXN7O15265 892 aaPredicted RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 LINC01565O15544 149 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 EYA4O95677 639 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ARAFP10398 606 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 SELPP16109 830 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 AMPD1P23109 780 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 WEE1P30291 646 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 RBM25P49756 843 aaKnown RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 CPT1AP50416 773 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 CLCN5P51795 746 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ATXN1P54253 815 aaKnown RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 ARHGAP8P85298 464 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ADAM15Q13444 863 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 SWI5Q1ZZU3 235 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 TATDN1Q6P1N9 297 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 LRRC69Q6ZNQ3 347 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 LRRC8DQ7L1W4 858 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ALDH16A1Q8IZ83 802 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 DCLK2Q8N568 766 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ANKRD44Q8N8A2 993 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 SPATA5Q8NB90 893 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 KREMEN2Q8NCW0 462 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 STK32AQ8WU08 396 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 KAZALD1Q96I82 304 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 RTKNQ9BST9 563 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 MTG1Q9BT17 334 aaPredicted RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 C11orf84Q9BUA3 381 aaPredicted RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 TEX13BQ9BXU2 312 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 PHACTR1Q9C0D0 580 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 NEUROD4Q9HD90 331 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 ANGPTL2Q9UKU9 493 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 HCN2Q9UL51 889 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 SORCS3Q9UPU3 1222 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 RWDD3Q9Y3V2 267 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms