RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 XXYLT1Q8NBI6 393 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 RIOX1Q9H6W3 641 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 NUB1Q9Y5A7 615 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 PFASO15067 1338 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 MAFGO15525 162 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 SLC26A4O43511 780 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 GNAT1P11488 350 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 KIAA1524Q8TCG1 905 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 MTRQ99707 1265 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 TYW1Q9NV66 732 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 SLC16A4O15374 487 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 NSFP46459 744 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 RIT2Q99578 217 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
USP47-207ENST00000527733 MYL3P08590 195 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 ZSCAN20P17040 1043 aaPredicted RBP16.41■□□□□ 0.22
USP47-207ENST00000527733 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 MXRA8Q9BRK3 442 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 ANKS1AQ92625 1134 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
USP47-207ENST00000527733 HOXD10P28358 340 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 OSTNP61366 133 aa16.41■□□□□ 0.22
USP47-207ENST00000527733 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
USP47-207ENST00000527733 CLDN3O15551 220 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 STAT5BP51692 787 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 ZNF365Q70YC5 407 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 DLG5Q8TDM6 1919 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 LRRN2O75325 713 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 GGPS1O95749 300 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 PHKA2P46019 1235 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
USP47-207ENST00000527733 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 EZRP15311 586 aaKnown RBP16.4■□□□□ 0.22
USP47-207ENST00000527733 CCDC91Q7Z6B0 441 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
USP47-207ENST00000527733 FAM170AA1A519 330 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.227e-7■■■■□ 24.6
USP47-207ENST00000527733 XKR3Q5GH77 459 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
USP47-207ENST00000527733 DAPK3O43293 454 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
USP47-207ENST00000527733 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
USP47-207ENST00000527733 ABI1Q8IZP0 508 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
USP47-207ENST00000527733 PPP1R9AQ9ULJ8 1098 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 VEGFAP15692 232 aaPredicted RBP16.39■□□□□ 0.21
USP47-207ENST00000527733 CBX1P83916 185 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 CCDC117Q8IWD4 279 aaPredicted RBP16.39■□□□□ 0.21
USP47-207ENST00000527733 ZFPM1Q8IX07 1006 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 THNSL1Q8IYQ7 743 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 OPA1O60313 960 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 SEPT1Q8WYJ6 367 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 C2orf40Q9H1Z8 148 aa16.39■□□□□ 0.21
USP47-207ENST00000527733 BUB1O43683 1085 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 CCDC25Q86WR0 208 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 PANX2Q96RD6 677 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 C7orf25Q9BPX7 421 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 HIP1RO75146 1068 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 VCAM1P19320 739 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 CCDC170Q8IYT3 715 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 MAIP1Q8WWC4 291 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 TIPINQ9BVW5 301 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 FAM198AQ9UFP1 575 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 HYOU1Q9Y4L1 999 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 PKN1Q16512 942 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 KCTD17Q8N5Z5 321 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 FAM133AQ8N9E0 248 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 POLR3FQ9H1D9 316 aaPredicted RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 NXF1Q9UBU9 619 aaKnown RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 DGAT1O75907 488 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 RPA1P27694 616 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 NFX1Q12986 1120 aaKnown RBP16.38■□□□□ 0.21
USP47-207ENST00000527733 PTPAQ15257 358 aa16.38■□□□□ 0.21
USP47-207ENST00000527733 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms