RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ECM1Q16610 540 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 KIAA0753Q2KHM9 967 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 ATP8B4Q8TF62 1192 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 FAM167AQ96KS9 214 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 GLT1D1Q96MS3 346 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 NT5C3AQ9H0P0 336 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 RNPEPQ9H4A4 650 aa18.5■□□□□ 0.55
CAPN1-205ENST00000526954 FAM237AA0A1B0GTK4 181 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 A0A1W2PQ45 241 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-205ENST00000526954 A0A1W2PQY0 241 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 POTEB3A0JP26 581 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 COL6A1P12109 1028 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 PRKCEQ02156 737 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 TMEM119Q4V9L6 283 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 XKR3Q5GH77 459 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 POTEBQ6S5H4 581 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 BBXQ8WY36 941 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-205ENST00000526954 CALML4Q96GE6 196 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 PNMA5Q96PV4 448 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 NACC1Q96RE7 527 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 NIFKQ9BYG3 293 aaKnown RBP18.49■□□□□ 0.55
CAPN1-205ENST00000526954 SEZ6LQ9BYH1 1024 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 NRBP2Q9NSY0 501 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 CCDC39Q9UFE4 941 aa18.49■□□□□ 0.55
CAPN1-205ENST00000526954 HBP1O60381 514 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 OATP04181 439 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 MARK3P27448 753 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 CKAP2LQ8IYA6 745 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 CDK5RAP3Q96JB5 506 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 DDX19AQ9NUU7 478 aaKnown RBP18.48■□□□□ 0.55
CAPN1-205ENST00000526954 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 ARID2Q68CP9 1835 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 GRIN2DO15399 1336 aa18.48■□□□□ 0.55
CAPN1-205ENST00000526954 GOLGA6L4A6NEF3 574 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 EN2P19622 333 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-205ENST00000526954 YWHABP31946 246 aaKnown RBP18.47■□□□□ 0.55
CAPN1-205ENST00000526954 PSMC6P62333 389 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 KARSQ15046 597 aaKnown RBP18.47■□□□□ 0.55
CAPN1-205ENST00000526954 NBPF20Q3BBV1 942 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 NFRKBQ6P4R8 1299 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 POTEGQ6S5H5 508 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 ANO5Q75V66 913 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 OTUD6AQ7L8S5 288 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 TNS4Q8IZW8 715 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 MRPS27Q92552 414 aaKnown RBP18.47■□□□□ 0.55
CAPN1-205ENST00000526954 STARD7Q9NQZ5 370 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 ANKEF1Q9NU02 776 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 DBR1Q9UK59 544 aaKnown RBP18.47■□□□□ 0.55
CAPN1-205ENST00000526954 HPSEQ9Y251 543 aa18.47■□□□□ 0.55
CAPN1-205ENST00000526954 COL1A2P08123 1366 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 A0A087X0B3 334 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 PRPF40AO75400 957 aaKnown RBP18.46■□□□□ 0.55
CAPN1-205ENST00000526954 SMIM10L2AP0DMW4 78 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 SMIM10L2BP0DMW5 78 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 HOXC8P31273 242 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-205ENST00000526954 ITGA7Q13683 1181 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 ZNF484Q5JVG2 852 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 UBE2Q1Q7Z7E8 422 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 VTI1AQ96AJ9 217 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 PYM1Q9BRP8 204 aaKnown RBP18.46■□□□□ 0.55
CAPN1-205ENST00000526954 DNM3Q9UQ16 869 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 TRPC6Q9Y210 931 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 PPME1Q9Y570 386 aa18.46■□□□□ 0.55
CAPN1-205ENST00000526954 TRIP12Q14669 1992 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 A0A0U1RQG5 324 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 ZBTB42B2RXF5 422 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 ZBTB39O15060 712 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 INSRRP14616 1297 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 PFKFB1P16118 471 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 PLCG1P19174 1290 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 UBE2HP62256 183 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 TARBP2Q15633 366 aaKnown RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 RRAGBQ5VZM2 374 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 KCNK18Q7Z418 384 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 C7orf31Q8N865 590 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 FSIP1Q8NA03 581 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 RASSF8Q8NHQ8 419 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 PIGOQ8TEQ8 1089 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 CEP89Q96ST8 783 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 PLIN2Q99541 437 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 SENP6Q9GZR1 1112 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 C11orf49Q9H6J7 331 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 LMBRD1Q9NUN5 540 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 SEPT9Q9UHD8 586 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-205ENST00000526954 KCNH3Q9ULD8 1083 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 NRCAMQ92823 1304 aa18.45■□□□□ 0.54
CAPN1-205ENST00000526954 A0A1B0GVL5 298 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 RRN3P2A6NIE6 340 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 E9PMD0 336 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms