RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 ITGB1P05556 798 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 DNAJB1P25685 340 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 MSNP26038 577 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 SP4Q02446 784 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 TRAF1Q13077 416 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 FBXO47Q5MNV8 452 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 CAVIN1Q6NZI2 390 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 MTERF4Q7Z6M4 381 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 EFHBQ8N7U6 833 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 PIGSQ96S52 555 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 KRT23Q9C075 422 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 MRPL42Q9Y6G3 142 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 KMT2EQ8IZD2 1858 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 COASYQ13057 564 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 SEC23AQ15436 765 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 CWC27Q6UX04 472 aaKnown RBP13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 SPPL3Q8TCT6 385 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 TM6SF1Q9BZW5 370 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 CNNM2Q9H8M5 875 aa13.32□□□□□ -0.28
RPUSD4-203ENST00000526942 KIAA1671Q9BY89 1806 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 GLP2RO95838 553 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 TTC3P53804 2025 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 DSCC1Q9BVC3 393 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 USP15Q9Y4E8 981 aaPredicted RBP13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 TCHHQ07283 1943 aa13.31□□□□□ -0.28
RPUSD4-203ENST00000526942 MCM5P33992 734 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 NRIP1P48552 1158 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 CRIPAKQ8N1N5 446 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 DNAJB3Q8WWF6 145 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 SENP7Q9BQF6 1050 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 FAM86C1Q9NVL1 165 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 CYTH3O43739 400 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 GFRA3O60609 400 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 CD52P31358 61 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 GRM4Q14833 912 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 GRIK4Q16099 956 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 PAN2Q504Q3 1202 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 CYB5R4Q7L1T6 521 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 POF1BQ8WVV4 589 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
RPUSD4-203ENST00000526942 NCLP19338 710 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 MARK3P27448 753 aa13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 AK2P54819 239 aa13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
RPUSD4-203ENST00000526942 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 PCNX4Q63HM2 1172 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 ASIC4Q96FT7 647 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 RPGRIP1Q96KN7 1286 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 FTHL17Q9BXU8 183 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 PRDM4Q9UKN5 801 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 ZDBF2Q9HCK1 2354 aa13.28□□□□□ -0.28
RPUSD4-203ENST00000526942 PTH1RQ03431 593 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 NLRX1Q86UT6 975 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 SUSD6Q92537 303 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 ERAP1Q9NZ08 941 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 SQORQ9Y6N5 450 aa13.27□□□□□ -0.28
RPUSD4-203ENST00000526942 KAT6AQ92794 2004 aa13.27□□□□□ -0.29
RPUSD4-203ENST00000526942 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms