RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 GIPC1O14908 333 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 CTNND1O60716 968 aaKnown RBP6.72□□□□□ -1.33
SF3B2-205ENST00000526653 EOMESO95936 686 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 CELA3AP09093 270 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 ITGB8P26012 769 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 MRE11P49959 708 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 TRIM60Q495X7 471 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 CAVIN4Q5BKX8 364 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 EPHA10Q5JZY3 1008 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 ANO1Q5XXA6 986 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 SLC23A3Q6PIS1 610 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 CCDC129Q6ZRS4 1044 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 SPACA3Q8IXA5 215 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 TSPYL6Q8N831 410 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 GPRC5AQ8NFJ5 357 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 ASB16Q96NS5 453 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 PRDM7Q9NQW5 492 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 MUC6Q6W4X9 2439 aa6.72□□□□□ -1.33
SF3B2-205ENST00000526653 CACNA1AO00555 2505 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 ADCYAP1R1P41586 468 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 KCNQ1P51787 676 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 HMGCS2P54868 508 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 TLE2Q04725 743 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 MFSD14CQ5VZR4 134 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 ASB11Q8WXH4 323 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 LPAR1Q92633 364 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
SF3B2-205ENST00000526653 MYH16Q9H6N6 1097 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 C12orf49Q9H741 205 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 TXNRD2Q9NNW7 524 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 DDX20Q9UHI6 824 aaKnown RBP6.71□□□□□ -1.34
SF3B2-205ENST00000526653 CYP8B1Q9UNU6 501 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 IVNS1ABPQ9Y6Y0 642 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 OTOFQ9HC10 1997 aa6.71□□□□□ -1.34
SF3B2-205ENST00000526653 LAMB1P07942 1786 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 CHD9Q3L8U1 2897 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 DDTLA6NHG4 134 aaPredicted RBP6.7□□□□□ -1.34
SF3B2-205ENST00000526653 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 DNM1LO00429 736 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ZNF853P0CG23 659 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 RAG1P15918 1043 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 CYP2C19P33261 490 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ZEB1P37275 1124 aaPredicted RBP6.7□□□□□ -1.34
SF3B2-205ENST00000526653 RGS2P41220 211 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 RGS3P49796 1198 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ATP2B2Q01814 1243 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PABPC4Q13310 644 aaKnown RBP eCLIP6.7□□□□□ -1.34
SF3B2-205ENST00000526653 IKZF1Q13422 519 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 INPP5AQ14642 412 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PCNX4Q63HM2 1172 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 SCARA3Q6AZY7 606 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ARMCX6Q7L4S7 300 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PLEKHH3Q7Z736 793 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 KCT2Q8NC54 265 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 LINS1Q8NG48 757 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 TMEM40Q8WWA1 233 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 USP6NLQ92738 828 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 UIMC1Q96RL1 719 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 STK31Q9BXU1 1019 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 CHMP4AQ9BY43 222 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PORCNQ9H237 461 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 CWC22Q9HCG8 908 aaKnown RBP6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 FLRT1Q9NZU1 646 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 MORF4L1Q9UBU8 362 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 XIRP2A4UGR9 3374 aa6.7□□□□□ -1.34
SF3B2-205ENST00000526653 PRAMEF27A3QJZ7 478 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 LRIG2O94898 1065 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 USP17L7P0C7H9 530 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 MAPK4P31152 587 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 GNAI1P63096 354 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 IRX3P78415 501 aaPredicted RBP6.69□□□□□ -1.34
SF3B2-205ENST00000526653 FPGSQ05932 587 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 ZP2Q05996 745 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 PICALMQ13492 652 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 ZNF124Q15973 351 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 WDR78Q5VTH9 848 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 LRFN4Q6PJG9 635 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 GPR142Q7Z601 462 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 ZNF507Q8TCN5 953 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 SOCS4Q8WXH5 440 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 RUNDC1Q96C34 613 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 SUGT1Q9Y2Z0 365 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 MAST3O60307 1309 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 DOCK3Q8IZD9 2030 aa6.69□□□□□ -1.34
SF3B2-205ENST00000526653 DLG5Q8TDM6 1919 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 DDX60LQ5H9U9 1706 aaKnown RBP6.68□□□□□ -1.34
SF3B2-205ENST00000526653 KBTBD13C9JR72 458 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 ENTPD3O75355 529 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 SLITRK5O94991 958 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 HERVK_113P62684 666 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms