RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 LCORQ96JN0 433 aaPredicted RBP6.82□□□□□ -1.32
CD44-223ENST00000526553 TEPSINQ96N21 525 aa6.82□□□□□ -1.32
CD44-223ENST00000526553 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
CD44-223ENST00000526553 INCENPQ9NQS7 918 aa6.82□□□□□ -1.32
CD44-223ENST00000526553 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
CD44-223ENST00000526553 MROH6A6NGR9 719 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 RASSF10A6NK89 507 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 KRT37O76014 449 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 KLHL18O94889 574 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 MPIG6BO95866 241 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 CYP1A1P04798 512 aaPredicted RBP6.81□□□□□ -1.32
CD44-223ENST00000526553 MC4RP32245 332 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 FNTBP49356 437 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 TMEM132BQ14DG7 1078 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 CATSPEREQ5SY80 951 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 FAM124AQ86V42 546 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 TACO1Q9BSH4 297 aaKnown RBP6.81□□□□□ -1.32
CD44-223ENST00000526553 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
CD44-223ENST00000526553 H0Y858 1186 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 H7C1D1 291 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 KPNA6O60684 536 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 NEK4P51957 841 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 ZFYVE27Q5T4F4 411 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 CNNM4Q6P4Q7 775 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 ZDHHC14Q8IZN3 488 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 AHI1Q8N157 1196 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 KLHL36Q8N4N3 616 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 MBD6Q96DN6 1003 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 GBP4Q96PP9 640 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 TARS2Q9BW92 718 aaKnown RBP6.8□□□□□ -1.32
CD44-223ENST00000526553 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 MTFR1LQ9H019 292 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 ACSS2Q9NR19 701 aa6.8□□□□□ -1.32
CD44-223ENST00000526553 DVL2O14641 736 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 KIF11P52732 1056 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 STILQ15468 1287 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 CREB3L3Q68CJ9 461 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 BORAQ6PGQ7 559 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 CXXC5Q7LFL8 322 aaKnown RBP6.79□□□□□ -1.32
CD44-223ENST00000526553 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 HIPK4Q8NE63 616 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 C20orf173Q96LM9 149 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 AMNQ9BXJ7 453 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 PCIF1Q9H4Z3 704 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 BARX1Q9HBU1 254 aaPredicted RBP6.79□□□□□ -1.32
CD44-223ENST00000526553 ZKSCAN5Q9Y2L8 839 aa6.79□□□□□ -1.32
CD44-223ENST00000526553 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 F2P00734 622 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 CYP17A1P05093 508 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 CTSWP56202 376 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 IL13RA1P78552 427 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 DSG1Q02413 1049 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 NFATC3Q12968 1075 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 NFIXQ14938 502 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 ZNF174Q15697 407 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 Q6ZUG5 572 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 RTN4RL1Q86UN2 441 aaPredicted RBP6.78□□□□□ -1.32
CD44-223ENST00000526553 LGI4Q8N135 537 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 AJUBAQ96IF1 538 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
CD44-223ENST00000526553 ADAM7Q9H2U9 754 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 UCKL1Q9NWZ5 548 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
CD44-223ENST00000526553 A0A087X0B3 334 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 PRAMEF22A3QJZ6 481 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 GSG1L2A8MUP6 293 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 GAS7O60861 476 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 CUTAO60888 179 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
CD44-223ENST00000526553 ECE1P42892 770 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 GYS2P54840 703 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 KANK2Q63ZY3 851 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 CALML6Q8TD86 181 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 FOXRED1Q96CU9 486 aaPredicted RBP6.77□□□□□ -1.33
CD44-223ENST00000526553 FOXB1Q99853 325 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 KATNBL1Q9H079 304 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 OR10A5Q9H207 317 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 DUSP10Q9Y6W6 482 aa6.77□□□□□ -1.33
CD44-223ENST00000526553 ATP2A2P16615 1042 aaKnown RBP6.76□□□□□ -1.33
CD44-223ENST00000526553 POLD1P28340 1107 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 CNR2P34972 360 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 ALDH6A1Q02252 535 aaKnown RBP6.76□□□□□ -1.33
CD44-223ENST00000526553 TOP3AQ13472 1001 aaPredicted RBP6.76□□□□□ -1.33
CD44-223ENST00000526553 PCBP1Q15365 356 aaKnown RBP eCLIP6.76□□□□□ -1.33
CD44-223ENST00000526553 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 PLEKHH3Q7Z736 793 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 CXorf38Q8TB03 319 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 OXSMQ9NWU1 459 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 MAPRE3Q9UPY8 281 aa6.76□□□□□ -1.33
CD44-223ENST00000526553 ZNF891A8MT65 544 aaPredicted RBP6.75□□□□□ -1.33
CD44-223ENST00000526553 B4GALT3O60512 393 aa6.75□□□□□ -1.33
CD44-223ENST00000526553 PDE8AO60658 829 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms