RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZMYND10O75800 440 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 ARHGAP4P98171 946 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 RGL1Q9NZL6 768 aa10.79□□□□□ -0.68
USP35-201ENST00000526425 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 DYTNA2CJ06 578 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 BUB1O43683 1085 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 KRT86O43790 486 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 SRGAP2O75044 1071 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 ATP1A2P50993 1020 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 FKBP1AP62942 108 aaKnown RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 CXCL9Q07325 125 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 PDCD2Q16342 344 aaPredicted RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 CCDC70Q6NSX1 233 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 LMCD1Q9NZU5 365 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 YDJCA8MPS7 323 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 ENTPD3O75355 529 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 IGBP1P78318 339 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 IFT88Q13099 833 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 TBC1D25Q3MII6 688 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 KCNK18Q7Z418 384 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 EZH1Q92800 747 aaPredicted RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 LSM14BQ9BX40 385 aaKnown RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 MYH6P13533 1939 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 GAS7O60861 476 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 CXCR5P32302 372 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 POLE2P56282 527 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 POLR2FP61218 127 aaKnown RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 SNCBQ16143 134 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 TRIM68Q6AZZ1 485 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 CYP2W1Q8TAV3 490 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 TBC1D5Q92609 795 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 DHTKD1Q96HY7 919 aaPredicted RBP10.78□□□□□ -0.68
USP35-201ENST00000526425 HDAC6Q9UBN7 1215 aa10.78□□□□□ -0.68
USP35-201ENST00000526425 CYP2J2P51589 502 aa10.77□□□□□ -0.68
USP35-201ENST00000526425 STAT2P52630 851 aa10.77□□□□□ -0.68
USP35-201ENST00000526425 GRB10Q13322 594 aa10.77□□□□□ -0.68
USP35-201ENST00000526425 HAUS3Q68CZ6 603 aa10.77□□□□□ -0.68
USP35-201ENST00000526425 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.68
USP35-201ENST00000526425 ZNF70Q9UC06 446 aaPredicted RBP10.77□□□□□ -0.68
USP35-201ENST00000526425 LGALS16A8MUM7 142 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 KRT83P78385 493 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ADAM9Q13443 819 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.69
USP35-201ENST00000526425 PANX2Q96RD6 677 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 MRIQ9BWK5 157 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 RNF225M0QZC1 329 aaPredicted RBP10.77□□□□□ -0.69
USP35-201ENST00000526425 CETN3O15182 167 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ATP8B1O43520 1251 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 NDUFA10O95299 355 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 CASP8Q14790 479 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 SLC30A9Q6PML9 568 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 SH3RF1Q7Z6J0 888 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 FAM76AQ8TAV0 307 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ANKS1AQ92625 1134 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 RAD54LQ92698 747 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 IDI2Q9BXS1 227 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ZNF341Q9BYN7 854 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 SH2D4AQ9H788 454 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 FAM198AQ9UFP1 575 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ROBO3Q96MS0 1386 aa10.77□□□□□ -0.69
USP35-201ENST00000526425 ATP6V1G1O75348 118 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 ABL1P00519 1130 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 EEF1GP26641 437 aaKnown RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 MAGEA1P43355 309 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 COASYQ13057 564 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 TRIM14Q14142 442 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 NT5DC1Q5TFE4 455 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 C4orf32Q8N8J7 132 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 IFIH1Q9BYX4 1025 aaKnown RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 NDST4Q9H3R1 872 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 DDX20Q9UHI6 824 aaKnown RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 MAFGO15525 162 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 NAA15Q9BXJ9 866 aaKnown RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 NT5C3AQ9H0P0 336 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 HERC5Q9UII4 1024 aaKnown RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 GOLGA6CA6NDK9 693 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 GOLGA6BA6NDN3 693 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 PPP1R11O60927 126 aaPredicted RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 FLOT1O75955 427 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
USP35-201ENST00000526425 GOLGA6DP0CG33 693 aa10.76□□□□□ -0.69
USP35-201ENST00000526425 NR2F2P24468 414 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms