RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 RTN1Q16799 776 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 KHSRPQ92945 711 aaKnown RBP eCLIP13.9□□□□□ -0.18
COLCA1-202ENST00000526150 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
COLCA1-202ENST00000526150 C11orf16Q9NQ32 467 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
COLCA1-202ENST00000526150 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.19
COLCA1-202ENST00000526150 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 SMCO2A6NFE2 343 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 BACH1O14867 736 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 ZBTB43O43298 467 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 ATG7O95352 703 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 HMGB1P09429 215 aaKnown RBP13.89□□□□□ -0.19
COLCA1-202ENST00000526150 SCG2P13521 617 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 RCAN1P53805 252 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 KRT76Q01546 638 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 ZP2Q05996 745 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 SMAD2Q15796 467 aaKnown RBP13.89□□□□□ -0.19
COLCA1-202ENST00000526150 WWC2Q6AWC2 1192 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 PCYT2Q99447 389 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 ANO3Q9BYT9 981 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 KCNH6Q9H252 994 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
COLCA1-202ENST00000526150 AAASQ9NRG9 546 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 PLAGL2Q9UPG8 496 aa13.89□□□□□ -0.19
COLCA1-202ENST00000526150 COL1A2P08123 1366 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 MEIS1O00470 390 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 LINC00271P0C7V0 271 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 SREBF1P36956 1147 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 HYAL1Q12794 435 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 SMAD4Q13485 552 aaKnown RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 MTHFD1LQ6UB35 978 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 RAB11FIP4Q86YS3 637 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 AGO4Q9HCK5 861 aaKnown RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 C1orf112Q9NSG2 853 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 CD207Q9UJ71 328 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 PCDHB12Q9Y5F1 795 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
COLCA1-202ENST00000526150 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
COLCA1-202ENST00000526150 GPR182O15218 404 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 MBTPS2O43462 519 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 NEFLP07196 543 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 ARP10275 920 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 KLRC1P26715 233 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 LTBRP36941 435 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
COLCA1-202ENST00000526150 NDUFV1P49821 464 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 FGD1P98174 961 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 UBE3AQ05086 875 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
COLCA1-202ENST00000526150 ADAM15Q13444 863 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
COLCA1-202ENST00000526150 MIS18BP1Q6P0N0 1132 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 TBC1D22BQ9NU19 505 aa13.87□□□□□ -0.19
COLCA1-202ENST00000526150 MRPL42Q9Y6G3 142 aaKnown RBP13.87□□□□□ -0.19
COLCA1-202ENST00000526150 IGKV6D-21A0A0A0MT36 114 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 GOLGA8AA7E2F4 631 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 STXBP3O00186 592 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 ITGB1P05556 798 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
COLCA1-202ENST00000526150 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
COLCA1-202ENST00000526150 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 CKAP2LQ8IYA6 745 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 CYP2W1Q8TAV3 490 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 SPPL3Q8TCT6 385 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 ZNF302Q9NR11 478 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
COLCA1-202ENST00000526150 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
COLCA1-202ENST00000526150 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
COLCA1-202ENST00000526150 PAN2Q504Q3 1202 aaKnown RBP13.85□□□□□ -0.19
COLCA1-202ENST00000526150 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms