RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 BACH1O14867 736 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-210ENST00000525990 CD52P31358 61 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
SSBP3-210ENST00000525990 PRR16Q569H4 304 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 SWSAP1Q6NVH7 229 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 PLPPR4Q7Z2D5 763 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-210ENST00000525990 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
SSBP3-210ENST00000525990 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 GNA11P29992 359 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 NPY5RQ15761 445 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 TEX2Q8IWB9 1127 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 CCDC12Q8WUD4 166 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-210ENST00000525990 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
SSBP3-210ENST00000525990 APBB2Q92870 758 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 TM6SF1Q9BZW5 370 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF302Q9NR11 478 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
SSBP3-210ENST00000525990 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 ENPP3O14638 875 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 EPB41L2O43491 1005 aaKnown RBP13.68□□□□□ -0.22
SSBP3-210ENST00000525990 KLRC1P26715 233 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 NLRP5P59047 1200 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
SSBP3-210ENST00000525990 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
SSBP3-210ENST00000525990 SCRN1Q12765 414 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 TMEM266Q2M3C6 531 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 EPC2Q52LR7 807 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 PDXDC2PQ6P474 469 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 RSPH3Q86UC2 560 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-210ENST00000525990 FBXO22Q8NEZ5 403 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-210ENST00000525990 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 TRPV2Q9Y5S1 764 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
SSBP3-210ENST00000525990 MSH4O15457 936 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 CHMP2AO43633 222 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 TDP2O95551 362 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 LINC00271P0C7V0 271 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 CIITAP33076 1130 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-210ENST00000525990 UGCGQ16739 394 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 FAM160B1Q5W0V3 765 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 TMEM40Q8WWA1 233 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 RC3H2Q9HBD1 1191 aaKnown RBP13.67□□□□□ -0.22
SSBP3-210ENST00000525990 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
SSBP3-210ENST00000525990 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 SMIM35A0A1B0GVV1 85 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 M0R2N6 131 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 CPLX1O14810 134 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF862O60290 1169 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 HBP1O60381 514 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 LARGE1O95461 756 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 C22orf31O95567 290 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 IBSPP21815 317 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-210ENST00000525990 GATMP50440 423 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-210ENST00000525990 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 KIAA0319LQ8IZA0 1049 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
SSBP3-210ENST00000525990 CELF4Q9BZC1 486 aaKnown RBP13.66□□□□□ -0.22
SSBP3-210ENST00000525990 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 TBC1D22BQ9NU19 505 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-210ENST00000525990 MYO7AQ13402 2215 aa13.66□□□□□ -0.22
SSBP3-210ENST00000525990 ADGRA3Q8IWK6 1321 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 MGEA5O60502 916 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 CSPG5O95196 566 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 DEXIO95424 95 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
SSBP3-210ENST00000525990 SEC24BO95487 1268 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms