RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SLC39A2Q9NP94 309 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 SRRDQ9UH36 339 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 CBLCQ9ULV8 474 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 SNAPC4Q5SXM2 1469 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 ABCA10Q8WWZ4 1543 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 GLI2P10070 1586 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 CHD1O14646 1710 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 DIP2BQ9P265 1576 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 AQRO60306 1485 aaKnown RBP eCLIP2.8□□□□□ -1.96
CD44-212ENST00000524922 TRAV20A0A0B4J274 112 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 FAM47E-STBD1D6RA91 191 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 H0Y858 1186 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 FZD7O75084 574 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 AOAHP28039 575 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 ETV4P43268 484 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 IL13RA1P78552 427 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 GNL2Q13823 731 aaKnown RBP2.8□□□□□ -1.96
CD44-212ENST00000524922 NFYCQ13952 458 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 USP10Q14694 798 aaKnown RBP2.8□□□□□ -1.96
CD44-212ENST00000524922 EIF4HQ15056 248 aaKnown RBP2.8□□□□□ -1.96
CD44-212ENST00000524922 KANK2Q63ZY3 851 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 TRIM68Q6AZZ1 485 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 MAMDC4Q6UXC1 1216 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 RNF207Q6ZRF8 634 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 TAX1BP1Q86VP1 789 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 BCL6BQ8N143 479 aaPredicted RBP2.8□□□□□ -1.96
CD44-212ENST00000524922 EXOC2Q96KP1 924 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 MRIQ9BWK5 157 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 SPATA9Q9BWV2 254 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 AMNQ9BXJ7 453 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 ZDHHC5Q9C0B5 715 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 DEF6Q9H4E7 631 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 ZFR2Q9UPR6 939 aaKnown RBP2.8□□□□□ -1.96
CD44-212ENST00000524922 TCAF1Q9Y4C2 921 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 SLC30A1Q9Y6M5 507 aa2.8□□□□□ -1.96
CD44-212ENST00000524922 TOP2BQ02880 1626 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 KIAA0586Q9BVV6 1533 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 ESYT3A0FGR9 886 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 IQCA1LA6NCM1 817 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 RASSF10A6NK89 507 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 OVOL3O00110 214 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 NARSO43776 548 aaKnown RBP2.79□□□□□ -1.96
CD44-212ENST00000524922 DIAPH1O60610 1272 aaKnown RBP2.79□□□□□ -1.96
CD44-212ENST00000524922 CUTAO60888 179 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 RAD17O75943 681 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 FBXO21O94952 628 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 PDE6AP16499 860 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 MC4RP32245 332 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 GDF5P43026 501 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 HMGA2P52926 109 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 JAM2P57087 298 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 HGFACQ04756 655 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 IFRD2Q12894 506 aaPredicted RBP2.79□□□□□ -1.96
CD44-212ENST00000524922 FOXE3Q13461 319 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 RASGRF1Q13972 1273 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 NOLC1Q14978 699 aaKnown RBP eCLIP2.79□□□□□ -1.96
CD44-212ENST00000524922 GPR19Q15760 415 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 FIGNQ5HY92 759 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 FAM209AQ5JX71 171 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 PCSK4Q6UW60 755 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 ARHGAP36Q6ZRI8 547 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 OSTM1Q86WC4 334 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 IL17DQ8TAD2 202 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 WNK4Q96J92 1243 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 LRRC37BQ96QE4 947 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 DPYSL5Q9BPU6 564 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 MENTQ9BUN1 341 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 CARD11Q9BXL7 1154 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 JADE2Q9NQC1 790 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 HECAQ9UBI9 543 aaPredicted RBP2.79□□□□□ -1.96
CD44-212ENST00000524922 OAZ3Q9UMX2 235 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 KDM6BO15054 1643 aa2.79□□□□□ -1.96
CD44-212ENST00000524922 GRIN2AQ12879 1464 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 IQSEC2Q5JU85 1478 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 TEX14Q8IWB6 1497 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 SOGA1O94964 1423 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 NPIPB8E9PQR5 432 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 PYGMP11217 842 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 CR2P20023 1033 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 LACTBP83111 547 aaPredicted RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 PAK1Q13153 545 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 SERINC3Q13530 473 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 PRKD1Q15139 912 aaPredicted RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 FNDC7Q5VTL7 733 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 BTBD8Q5XKL5 378 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 TMEM200BQ69YZ2 307 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 C16orf59Q7L2K0 433 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 MAMDC2Q7Z304 686 aaPredicted RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 PTRH1Q86Y79 214 aaKnown RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 NOSTRINQ8IVI9 506 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 SCUBE1Q8IWY4 988 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 GPR135Q8IZ08 494 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 LRRC47Q8N1G4 583 aaKnown RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 JMYQ8N9B5 988 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 ZBTB38Q8NAP3 1195 aaPredicted RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 GSTCDQ8NEC7 633 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 CACTINQ8WUQ7 758 aaKnown RBP2.78□□□□□ -1.96
CD44-212ENST00000524922 PTPRN2Q92932 1015 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 EXTL1Q92935 676 aa2.78□□□□□ -1.96
CD44-212ENST00000524922 ADOQ96SZ5 270 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms