RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 FRMD3A2A2Y4 597 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 C19orf81C9J6K1 198 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 NFIBO00712 420 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 EIF3DO15371 548 aaKnown RBP eCLIP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 KRT86O43790 486 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 PSMD10O75832 226 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 NDUFA10O95299 355 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 EGFRP00533 1210 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 BCRP11274 1271 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 MYCLP12524 364 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 CCND2P30279 289 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ERVK-24P63145 666 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 SPP2Q13103 211 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 MTMR1Q13613 665 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 GIT2Q14161 759 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 KNOP1Q1ED39 458 aaKnown RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 MIIPQ5JXC2 388 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ZNF569Q5MCW4 686 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 UBXN4Q92575 508 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ZIC5Q96T25 663 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 LXNQ9BS40 222 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 LSM14BQ9BX40 385 aaKnown RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 UNC45AQ9H3U1 944 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 PARVGQ9HBI0 331 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 FAM207AQ9NSI2 230 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 TYW1Q9NV66 732 aaKnown RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 EPN1Q9Y6I3 576 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-222ENST00000524006 LCTP09848 1927 aa11.86□□□□□ -0.51
SPIDR-222ENST00000524006 PAPPA2Q9BXP8 1791 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 EML1O00423 815 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 AKR1B10O60218 316 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 EIF2AK2P19525 551 aaKnown RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 JAK3P52333 1124 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 OAZ1P54368 228 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 BACE1P56817 501 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 NCBP1Q09161 790 aaKnown RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 ADAM9Q13443 819 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 ALCAMQ13740 583 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TDRD12Q587J7 1177 aaKnown RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 DCAF17Q5H9S7 520 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TCERG1LQ5VWI1 586 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 OTOP1Q7RTM1 612 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 FAM178BQ8IXR5 827 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 SYCP3Q8IZU3 236 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 CYP2W1Q8TAV3 490 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 SCFD1Q8WVM8 642 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TBC1D5Q92609 795 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 RUSC1Q9BVN2 902 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 EDEM3Q9BZQ6 932 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 L2HGDHQ9H9P8 463 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 RGL1Q9NZL6 768 aa11.85□□□□□ -0.51
SPIDR-222ENST00000524006 ASTN2O75129 1339 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-222ENST00000524006 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-222ENST00000524006 PDXKO00764 312 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 CA12O43570 354 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPIDR-222ENST00000524006 NR3C1P04150 777 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ARP10275 920 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 XRCC5P13010 732 aaKnown RBP11.84□□□□□ -0.51
SPIDR-222ENST00000524006 RGS19P49795 217 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 HMGCS2P54868 508 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 PSMC6P62333 389 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 KRT76Q01546 638 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 PLS1Q14651 629 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ELF2Q15723 593 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 CCDC122Q5T0U0 273 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 RINT1Q6NUQ1 792 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 TRIM65Q6PJ69 517 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 RRAGAQ7L523 313 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 TSC1Q92574 1164 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
SPIDR-222ENST00000524006 ZSWIM4Q9H7M6 989 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms