RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 FBXO43Q4G163 708 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 WLSQ5T9L3 541 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 ITPRIPL1Q6GPH6 555 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 FAM173BQ6P4H8 233 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 TOGARAM2Q6ZUX3 1019 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 BNIPLQ7Z465 357 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 TBC1D1Q86TI0 1168 aaPredicted RBP7.12□□□□□ -1.27
SDC2-208ENST00000523877 PALM2Q8IXS6 379 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 TCEAL8Q8IYN2 117 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 NAT8LQ8N9F0 302 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 OR52K1Q8NGK4 314 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 CABLES1Q8TDN4 633 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 PXYLP1Q8TE99 480 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 NCLNQ969V3 563 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 FAM149B1Q96BN6 582 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 FAM167AQ96KS9 214 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 MFSD14AQ96MC6 490 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 ADPGKQ9BRR6 497 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 ZPBPQ9BS86 351 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 DESI2Q9BSY9 194 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 CCDC106Q9BWC9 280 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 EHD2Q9NZN4 543 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 CEP72Q9P209 647 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 LCMT1Q9UIC8 334 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 TEKT2Q9UIF3 430 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 RASAL2Q9UJF2 1139 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
SDC2-208ENST00000523877 PTBP2Q9UKA9 531 aaKnown RBP7.12□□□□□ -1.27
SDC2-208ENST00000523877 KIAA1257Q9ULG3 409 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 HPS5Q9UPZ3 1129 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 MED16Q9Y2X0 877 aa7.12□□□□□ -1.27
SDC2-208ENST00000523877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.27
SDC2-208ENST00000523877 SH3TC1Q8TE82 1336 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 TRAV6A0A075B6T7 132 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ARHGAP10A1A4S6 786 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ERICH2A1L162 156 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 FAM221AA4D161 298 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 LRRD1A4D1F6 860 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 SFI1A8K8P3 1242 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 PSMD14O00487 310 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 GLRX3O76003 335 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 KRT4P19013 534 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 HNRNPH1P31943 449 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 MCM4P33991 863 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 MLH1P40692 756 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ABCG1P45844 678 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ALDH18A1P54886 795 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 SSTP61278 116 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 RPP38P78345 283 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 ACY1Q03154 408 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 VAC14Q08AM6 782 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 SCRN1Q12765 414 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 IFIT5Q13325 482 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 MSLNQ13421 630 aaPredicted RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 ITGA7Q13683 1181 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ASIC2Q16515 512 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 INSCQ1MX18 579 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ARHGAP29Q52LW3 1261 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 BEND6Q5SZJ8 279 aaPredicted RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 RNASEH2BQ5TBB1 312 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 NCAPH2Q6IBW4 605 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 LRSAM1Q6UWE0 723 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 MFSD6Q6ZSS7 791 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 C16orf86Q6ZW13 317 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 OSTM1Q86WC4 334 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 CCDC50Q8IVM0 306 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 DEPTORQ8TB45 409 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 CASP10Q92851 521 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 CNKSR1Q969H4 720 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ATP6V1G3Q96LB4 118 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 FAM161BQ96MY7 647 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 TTC25Q96NG3 672 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 ACAP3Q96P50 834 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 UCN2Q96RP3 112 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 HNRNPABQ99729 332 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 REPIN1Q9BWE0 567 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 FAM129AQ9BZQ8 928 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 DRC3Q9H069 523 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 WNT5BQ9H1J7 359 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 CLEC4AQ9UMR7 237 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
SDC2-208ENST00000523877 CFL2Q9Y281 166 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 UHRF1BP1LA0JNW5 1464 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 GRIN2BQ13224 1484 aa7.11□□□□□ -1.27
SDC2-208ENST00000523877 TOP2BQ02880 1626 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 SHROOM2Q13796 1616 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 GPR75-ASB3A0A0A6YYF3 556 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 STX16-NPEPL1H3BU86 382 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 PSMD9O00233 223 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 VWA5AO00534 786 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 TRDMT1O14717 391 aaKnown RBP7.1□□□□□ -1.27
SDC2-208ENST00000523877 SORBS3O60504 671 aa7.1□□□□□ -1.27
SDC2-208ENST00000523877 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms