RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PRKCEQ02156 737 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-224ENST00000523873 CTTNQ14247 550 aaKnown RBP14.42□□□□□ -0.1
VEGFA-224ENST00000523873 IL17AQ16552 155 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 RUFY4Q6ZNE9 571 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 RDM1Q8NG50 284 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 SCLYQ96I15 445 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 DYDC2Q96IM9 177 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 SH2D3AQ9BRG2 576 aa14.42□□□□□ -0.1
VEGFA-224ENST00000523873 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 ZBTB42B2RXF5 422 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 HBP1O60381 514 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 STBD1O95210 358 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 OATP04181 439 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 EPHA7Q15375 998 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 TRIM71Q2Q1W2 868 aaKnown RBP14.41□□□□□ -0.1
VEGFA-224ENST00000523873 PRPF38BQ5VTL8 546 aaKnown RBP14.41□□□□□ -0.1
VEGFA-224ENST00000523873 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 EIF2AK1Q9BQI3 630 aaKnown RBP14.41□□□□□ -0.1
VEGFA-224ENST00000523873 SEPT9Q9UHD8 586 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-224ENST00000523873 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 GBF1Q92538 1859 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 PTPRSQ13332 1948 aa14.41□□□□□ -0.1
VEGFA-224ENST00000523873 A0A087WWV3 80 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 SLC26A2P50443 739 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 EPHB4P54760 987 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 PSMC5P62195 406 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 ATP2C1P98194 919 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 CEBPZQ03701 1054 aaKnown RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 PTK7Q13308 1070 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 SF3A1Q15459 793 aaKnown RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 PLA2G4FQ68DD2 849 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 SERINC5Q86VE9 423 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 TPH2Q8IWU9 490 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 LBHD1Q9BQE6 289 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-224ENST00000523873 LXNQ9BS40 222 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 MYH11P35749 1972 aa14.4□□□□□ -0.1
VEGFA-224ENST00000523873 MICAL3Q7RTP6 2002 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 ZBTB39O15060 712 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 SLITRK3O94933 977 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 F13A1P00488 732 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 CTSHP09668 335 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 ZSCAN22P10073 491 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-224ENST00000523873 GNAT1P11488 350 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 CKBP12277 381 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 CSF2RAP15509 400 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 KLRC1P26715 233 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 THPOP40225 353 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 QARSP47897 775 aaKnown RBP14.39□□□□□ -0.11
VEGFA-224ENST00000523873 TMEM266Q2M3C6 531 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 MTERF2Q49AM1 385 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 ZNF618Q5T7W0 954 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 GDF15Q99988 308 aa14.39□□□□□ -0.11
VEGFA-224ENST00000523873 FAM49AQ9H0Q0 323 aaPredicted RBP14.39□□□□□ -0.11
VEGFA-224ENST00000523873 COL1A2P08123 1366 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 MBLAC1A4D2B0 266 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 RRN3P2A6NIE6 340 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 MED24O75448 989 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 P4HBP07237 508 aaKnown RBP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ACRP10323 421 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 GRIN1Q05586 938 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 FPGSQ05932 587 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 BFSP2Q13515 415 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ZNF484Q5JVG2 852 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ANO5Q75V66 913 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 DEFB128Q7Z7B8 93 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 RETREG2Q8NC44 543 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 CAGE1Q8TC20 777 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 DNAJB3Q8WWF6 145 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 FAM167AQ96KS9 214 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 NRBP2Q9NSY0 501 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
VEGFA-224ENST00000523873 ZDHHC9Q9Y397 364 aa14.38□□□□□ -0.11
VEGFA-224ENST00000523873 VWA3AA6NCI4 1184 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 LAD1O00515 517 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 C22orf31O95567 290 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 SPATA31C1P0DKV0 1188 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 CDC25AP30304 524 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 PRPHP41219 470 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 NPEPPSP55786 919 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 RBL2Q08999 1139 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms