RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 CUL4BQ13620 913 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 Q4G0T1 1027 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 TMEM119Q4V9L6 283 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 NBPF12Q5TAG4 269 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF658Q5TYW1 1059 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SPATA1Q5VX52 437 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SLCO4C1Q6ZQN7 724 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SLFN12Q8IYM2 578 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SNX29Q8TEQ0 813 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 CRYGNQ8WXF5 182 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 STAMQ92783 540 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 HAS1Q92839 578 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SLF1Q9BQI6 1058 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 MMTAG2Q9BU76 263 aaKnown RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 XPO4Q9C0E2 1151 aaKnown RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 LRRC27Q9C0I9 530 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 HSD3B7Q9H2F3 369 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 TTC12Q9H892 705 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 KCNMB3Q9NPA1 279 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 PICK1Q9NRD5 415 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 IFNKQ9P0W0 207 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 IMPACTQ9P2X3 320 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 SCAF8Q9UPN6 1271 aaKnown RBP7.68□□□□□ -1.18
CSMD1-211ENST00000523062 NFE2L3Q9Y4A8 694 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 PITPNM2Q9BZ72 1349 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 DOCK1Q14185 1865 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 MYH7BA7E2Y1 1941 aa7.68□□□□□ -1.18
CSMD1-211ENST00000523062 RHOBTB3O94955 611 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 SERPINC1P01008 464 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 ICAM1P05362 532 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF18P17022 549 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 TAL1P17542 331 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-211ENST00000523062 VCAM1P19320 739 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 INPP5BP32019 993 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PPP1R2P41236 205 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 ASIC1P78348 528 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PAK1Q13153 545 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 GRB10Q13322 594 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 STIM1Q13586 685 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
CSMD1-211ENST00000523062 NOL9Q5SY16 702 aaKnown RBP7.67□□□□□ -1.18
CSMD1-211ENST00000523062 HAUS3Q68CZ6 603 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 KLHL10Q6JEL2 608 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 SV2BQ7L1I2 683 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 CCDC186Q7Z3E2 898 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 LDHDQ86WU2 507 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PRPF38AQ8NAV1 312 aaKnown RBP7.67□□□□□ -1.18
CSMD1-211ENST00000523062 CCDC150Q8NCX0 1101 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 LARP4BQ92615 738 aaKnown RBP7.67□□□□□ -1.18
CSMD1-211ENST00000523062 RAD54LQ92698 747 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 FAM20AQ96MK3 541 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PNMA5Q96PV4 448 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 WRNIP1Q96S55 665 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PLIN2Q99541 437 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 C7orf25Q9BPX7 421 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 TRIM9Q9C026 710 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 NT5C3AQ9H0P0 336 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 EXOC1Q9NV70 894 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 FBXO28Q9NVF7 368 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 FANCLQ9NW38 375 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 RNF181Q9P0P0 153 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 RWDD2AQ9UIY3 292 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 CCPG1Q9ULG6 757 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PCDHA12Q9UN75 941 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 CTNND2Q9UQB3 1225 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 RABGAP1Q9Y3P9 1069 aa7.67□□□□□ -1.18
CSMD1-211ENST00000523062 PSMA7O14818 248 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 KLRC4O43908 158 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 CFBP00751 764 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ATP1A3P13637 1013 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 PTPRAP18433 802 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 CDK11BP21127 795 aaKnown RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 HOXA13P31271 388 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF76P36508 570 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 CCT6AP40227 531 aaKnown RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 EPS15P42566 896 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 BACE1P56817 501 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 UBASH3AP57075 661 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 SPAG1Q07617 926 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 TPD52L1Q16890 204 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 SUPT20HL1Q3ZLR7 823 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 PRR16Q569H4 304 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 HYIQ5T013 277 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 CNNM4Q6P4Q7 775 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 TMC6Q7Z403 805 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 FCHSD1Q86WN1 690 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 SAMD3Q8N6K7 520 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF280CQ8ND82 737 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ERMNQ8TAM6 284 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ETNPPLQ8TBG4 499 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 C12orf42Q96LP6 360 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF830Q96NB3 372 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 P2RX7Q99572 595 aaKnown RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms