RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 COX20Q5RI15 118 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 PRR23CQ6ZRP0 262 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 OTOP2Q7RTS6 562 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 KLHDC9Q8NEP7 349 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 NUP88Q99567 741 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-220ENST00000522658 NACAP1Q9BZK3 213 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 NYAP2Q9P242 653 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 CLIP2Q9UDT6 1046 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 KIF28PB7ZC32 967 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 F5H6K3 240 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 J3QW42 95 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 SNAI1O95863 264 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-220ENST00000522658 TTLL1O95922 423 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 PFKMP08237 780 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 SUPT20HL2P0C7V6 817 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 ATP2A2P16615 1042 aaKnown RBP7.38□□□□□ -1.23
PABPC1-220ENST00000522658 GNAT2P19087 354 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 CYP2C18P33260 490 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 SOX18P35713 384 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 PLA2G5P39877 138 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 OAZ1P54368 228 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 CCL23P55773 120 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 GJA9P57773 515 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 PDE4BQ07343 736 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 KLRC3Q07444 240 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 FSCN1Q16658 493 aaKnown RBP7.38□□□□□ -1.23
PABPC1-220ENST00000522658 FAM47CQ5HY64 1035 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 CTR9Q6PD62 1173 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 MAMDC4Q6UXC1 1216 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 FAM160B2Q86V87 743 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 FAM126BQ8IXS8 530 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 RPAP2Q8IXW5 612 aaPredicted RBP7.38□□□□□ -1.23
PABPC1-220ENST00000522658 CCDC144CPQ8IYA2 1237 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 FAM200AQ8TCP9 573 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 CHURC1Q8WUH1 139 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 HERVK_113Q902F9 699 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 HAUS7Q99871 368 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 UPF3AQ9H1J1 476 aaKnown RBP7.38□□□□□ -1.23
PABPC1-220ENST00000522658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.234e-12■□□□□ 10.7
PABPC1-220ENST00000522658 RNF146Q9NTX7 359 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 DDX19BQ9UMR2 479 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 ADAMTS5Q9UNA0 930 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 VCANP13611 3396 aa7.38□□□□□ -1.23
PABPC1-220ENST00000522658 BAZ2AQ9UIF9 1905 aaKnown RBP7.37□□□□□ -1.23
PABPC1-220ENST00000522658 GRXCR1A8MXD5 290 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 ATP2A1O14983 1001 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 RLBP1P12271 317 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 BMP3P12645 472 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 ALAS1P13196 640 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 ATP5JP18859 108 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 SLC1A4P43007 532 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 BEX3Q00994 111 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 ITGA7Q13683 1181 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CCDC96Q2M329 555 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 TKFCQ3LXA3 575 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 TMEM67Q5HYA8 995 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CXCL17Q6UXB2 119 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 NSMFQ6X4W1 530 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CMTR1Q8N1G2 835 aaKnown RBP7.37□□□□□ -1.23
PABPC1-220ENST00000522658 LRRC47Q8N1G4 583 aaKnown RBP7.37□□□□□ -1.23
PABPC1-220ENST00000522658 RETREG2Q8NC44 543 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 REPS2Q8NFH8 660 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CRBNQ96SW2 442 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 LRRCC1Q9C099 1032 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 FTOQ9C0B1 505 aaKnown RBP eCLIP7.37□□□□□ -1.23
PABPC1-220ENST00000522658 SLC38A10Q9HBR0 1119 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
PABPC1-220ENST00000522658 MTMR7Q9Y216 660 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 PCDHA11Q9Y5I1 949 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 CDH23Q9H251 3354 aa7.37□□□□□ -1.23
PABPC1-220ENST00000522658 PARP14Q460N5 1801 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 DNAJC25-GNG10A0A024R161 153 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 TSPY2A6NKD2 308 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 B4DLN1 442 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 TMEM232C9JQI7 657 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 F8W735 103 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 DYNC1LI2O43237 492 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 PSAPP07602 524 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 ZFYP08048 801 aaPredicted RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 KCNJ6P48051 423 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 CPT1AP50416 773 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 MRPL12P52815 198 aaKnown RBP7.36□□□□□ -1.23
PABPC1-220ENST00000522658 CHMP4BP1P59074 171 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 SLFN13Q68D06 897 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 Q6ZS46 218 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 EEPD1Q7L9B9 569 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 DEFB128Q7Z7B8 93 aa7.36□□□□□ -1.23
PABPC1-220ENST00000522658 SIAH1Q8IUQ4 282 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms