RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 MXRA8Q9BRK3 442 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 CLEC1BQ9P126 229 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 CD207Q9UJ71 328 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 TRPC6Q9Y210 931 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 PCDHA2Q9Y5H9 948 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 TRPV2Q9Y5S1 764 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 ZNF318Q5VUA4 2279 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 IGSF9BQ9UPX0 1349 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 SLC27A2O14975 620 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 MAFGO15525 162 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 LIFRP42702 1097 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 ACTR2P61160 394 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 HERC4Q5GLZ8 1057 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 WWC2Q6AWC2 1192 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 TMTC2Q8N394 836 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 P2RX5Q93086 422 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 TMEM87BQ96K49 555 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
TRAPPC9-213ENST00000522504 STXBP3O00186 592 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 MGEA5O60502 916 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 POF1BQ8WVV4 589 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 FTHL17Q9BXU8 183 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 CDHR5Q9HBB8 845 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 TECTAO75443 2155 aa17.47■□□□□ 0.39
TRAPPC9-213ENST00000522504 EYA4O95677 639 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 GLP2RO95838 553 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 CCNE2O96020 404 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 CALM1P0DP23 149 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 CALM2P0DP24 149 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 CALM3P0DP25 149 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 SCG2P13521 617 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 NDUFV1P49821 464 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 MRE11P49959 708 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 STAT5BP51692 787 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 PAK2Q13177 524 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 MTHFD1LQ6UB35 978 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 RBM23Q86U06 439 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 MICU3Q86XE3 530 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 EFHBQ8N7U6 833 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 POP1Q99575 1024 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 AZI2Q9H6S1 392 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 HCSTQ9UBK5 93 aa17.46■□□□□ 0.39
TRAPPC9-213ENST00000522504 NFASCO94856 1347 aa17.46■□□□□ 0.38
TRAPPC9-213ENST00000522504 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 PPFIA3O75145 1194 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 ATG7O95352 703 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 NRIP1P48552 1158 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 KRT76Q01546 638 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 FUT2Q10981 343 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 NAALADL2Q58DX5 795 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 SMRP1Q8NCR6 262 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 TMEM40Q8WWA1 233 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 NOC2LQ9Y3T9 749 aaKnown RBP17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 CNTNAP5Q8WYK1 1306 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 KDM3AQ9Y4C1 1321 aa17.45■□□□□ 0.38
TRAPPC9-213ENST00000522504 KIAA1671Q9BY89 1806 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 M0QZ92 97 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 MEIS1O00470 390 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 RPLP2P05387 115 aaKnown RBP17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 KIAA0319LQ8IZA0 1049 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 VN1R2Q8NFZ6 395 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 EDAQ92838 391 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 ANO3Q9BYT9 981 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 ERVK-5Q9HDB9 667 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 RIC8AQ9NPQ8 531 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 CFAP54Q96N23 3096 aa17.44■□□□□ 0.38
TRAPPC9-213ENST00000522504 ZBTB42B2RXF5 422 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 LOC730098B7Z3J9 87 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 PER2O15055 1255 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 ADAMTS3O15072 1205 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 KLRC1P26715 233 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 COASYQ13057 564 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 FAM102BQ5T8I3 360 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
TRAPPC9-213ENST00000522504 GINS2Q9Y248 185 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms