RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ARID2Q68CP9 1835 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 SMC2O95347 1197 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 CYP2C19P33261 490 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 DPYDQ12882 1025 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 LAMC2Q13753 1193 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 CTTNQ14247 550 aaKnown RBP14.58□□□□□ -0.08
CPNE3-205ENST00000522240 NT5DC1Q5TFE4 455 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 CCDC60Q8IWA6 550 aaPredicted RBP14.58□□□□□ -0.08
CPNE3-205ENST00000522240 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 CKAP2LQ8IYA6 745 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 BANK1Q8NDB2 785 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 SPATA20Q8TB22 786 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 SEPT1Q8WYJ6 367 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 NACC1Q96RE7 527 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 MTRQ99707 1265 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 BCAS3Q9H6U6 928 aa14.58□□□□□ -0.08
CPNE3-205ENST00000522240 WRAP73Q9P2S5 460 aaPredicted RBP14.58□□□□□ -0.08
CPNE3-205ENST00000522240 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.57□□□□□ -0.08
CPNE3-205ENST00000522240 GSTTP1A0A1W2PQM5 241 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 E9PMD0 336 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
CPNE3-205ENST00000522240 LGR5O75473 907 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 PPP1R37O75864 691 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 PLA2G4BP0C869 781 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 XRCC6P12956 609 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPNE3-205ENST00000522240 CYBAP13498 195 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 AFMP43652 599 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 SLC12A3P55017 1021 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 SP4Q02446 784 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 PNOCQ13519 176 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 MCM6Q14566 821 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 UGCGQ16739 394 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 CCDC144BQ3MJ40 725 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 LRSAM1Q6UWE0 723 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 GRAMD1CQ8IYS0 662 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 SYT2Q8N9I0 419 aaPredicted RBP14.57□□□□□ -0.08
CPNE3-205ENST00000522240 FBXO22Q8NEZ5 403 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 AFAP1L1Q8TED9 768 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 SMARCE1Q969G3 411 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 GPR20Q99678 358 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 FUCA2Q9BTY2 467 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 TRIM9Q9C026 710 aa14.57□□□□□ -0.08
CPNE3-205ENST00000522240 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
CPNE3-205ENST00000522240 BACH1O14867 736 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 HMGCRP04035 888 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 HOXD8P13378 290 aaPredicted RBP14.56□□□□□ -0.08
CPNE3-205ENST00000522240 AKR1A1P14550 325 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 SMPD1P17405 629 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 TCF7P36402 384 aaPredicted RBP14.56□□□□□ -0.08
CPNE3-205ENST00000522240 SARSP49591 514 aaKnown RBP14.56□□□□□ -0.08
CPNE3-205ENST00000522240 TNFAIP2Q03169 654 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 SASS6Q6UVJ0 657 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 TRIML1Q8N9V2 468 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 PXYLP1Q8TE99 480 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 COPS5Q92905 334 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 GSDMAQ96QA5 445 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 ZNF302Q9NR11 478 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 ANKEF1Q9NU02 776 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 KCND2Q9NZV8 630 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 FAM184BQ9ULE4 1060 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 GNEQ9Y223 722 aaKnown RBP14.56□□□□□ -0.08
CPNE3-205ENST00000522240 Q9Y3F1 56 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 PCDHA5Q9Y5H7 936 aa14.56□□□□□ -0.08
CPNE3-205ENST00000522240 MAFBQ9Y5Q3 323 aaPredicted RBP14.56□□□□□ -0.08
CPNE3-205ENST00000522240 MYH9P35579 1960 aaKnown RBP14.55□□□□□ -0.08
CPNE3-205ENST00000522240 MYMKA6NI61 221 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 ZNF862O60290 1169 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 SORBS3O60504 671 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 CYP11B2P19099 503 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 YWHABP31946 246 aaKnown RBP14.55□□□□□ -0.08
CPNE3-205ENST00000522240 SLC26A2P50443 739 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 PSMC6P62333 389 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 PRKCEQ02156 737 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 TYRO3Q06418 890 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 CUL4BQ13620 913 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 STX1AQ16623 288 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 SWSAP1Q6NVH7 229 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 GPBP1Q86WP2 473 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 SLAIN1Q8ND83 568 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 OR6J1Q8NGC5 347 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 RAET1EQ8TD07 263 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 FAM167AQ96KS9 214 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 AZI2Q9H6S1 392 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 RMND1Q9NWS8 449 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 TELO2Q9Y4R8 837 aa14.55□□□□□ -0.08
CPNE3-205ENST00000522240 ARHGEF35A5YM69 484 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 ADCY6O43306 1168 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 ADCY3O60266 1144 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 MMP3P08254 477 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 RARRES1P49788 294 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 SOX10P56693 466 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms