RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 STK36Q9NRP7 1315 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 SPTBN5Q9NRC6 3674 aaKnown RBP19.32■□□□□ 0.68
SQLE-205ENST00000521232 WDR81Q562E7 1941 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 CYP3A7-CYP3A51PA0A087WV96 503 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 LCHNA4D1U4 455 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 MSH4O15457 936 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 CTDNEP1O95476 244 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 POU3F3P20264 500 aaPredicted RBP19.32■□□□□ 0.68
SQLE-205ENST00000521232 ATP4AP20648 1035 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 IGFBP4P22692 258 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 CYP3A7P24462 503 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 Q4G0T1 1027 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 IER5Q5VY09 327 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 PDXDC2PQ6P474 469 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 MTHFD1LQ6UB35 978 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 USP38Q8NB14 1042 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 TRAPPC12Q8WVT3 735 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 TOP1MTQ969P6 601 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 RIT2Q99578 217 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 CERS4Q9HA82 394 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 SIP14410 1827 aa19.32■□□□□ 0.68
SQLE-205ENST00000521232 SMIM35A0A1B0GVV1 85 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.31■□□□□ 0.68
SQLE-205ENST00000521232 PSAPP07602 524 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 GHRP10912 638 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 MRPS6P82932 125 aaKnown RBP19.31■□□□□ 0.68
SQLE-205ENST00000521232 HTRA4P83105 476 aaPredicted RBP19.31■□□□□ 0.68
SQLE-205ENST00000521232 LPIN1Q14693 890 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 ZNF484Q5JVG2 852 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 FBXO47Q5MNV8 452 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 MYOCDQ8IZQ8 938 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 NME8Q8N427 588 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 SLC5A5Q92911 643 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 KCNJ14Q9UNX9 436 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 INSL6Q9Y581 213 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 CDY2AQ9Y6F7 541 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 SQORQ9Y6N5 450 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 COL1A2P08123 1366 aa19.31■□□□□ 0.68
SQLE-205ENST00000521232 PRRC2BQ5JSZ5 2229 aaKnown RBP19.31■□□□□ 0.68
SQLE-205ENST00000521232 EVPLQ92817 2033 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 EPOPA6NHQ4 379 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 RFXAPO00287 272 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 KLRC1P26715 233 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 ME3Q16798 604 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 FAM117BQ6P1L5 589 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 MOXD1Q6UVY6 613 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 BBXQ8WY36 941 aaPredicted RBP19.3■□□□□ 0.68
SQLE-205ENST00000521232 ARNTL2Q8WYA1 636 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 MBOAT7Q96N66 472 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 FAM49AQ9H0Q0 323 aaPredicted RBP19.3■□□□□ 0.68
SQLE-205ENST00000521232 TCEAL9Q9UHQ7 104 aa19.3■□□□□ 0.68
SQLE-205ENST00000521232 LOXHD1Q8IVV2 1947 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 LINC01553A4QN01 128 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 WDR64B1ANS9 1081 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 ZBTB42B2RXF5 422 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 DLL1O00548 723 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 XBP1P17861 261 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 NEK4P51957 841 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 NONOQ15233 471 aaKnown RBP eCLIP19.29■□□□□ 0.68
SQLE-205ENST00000521232 TSHZ1Q6ZSZ6 1077 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 KRT25Q7Z3Z0 450 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 SPRED2Q7Z698 418 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 PPM1EQ8WY54 764 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 GABBR1Q9UBS5 961 aa19.29■□□□□ 0.68
SQLE-205ENST00000521232 KDM3AQ9Y4C1 1321 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 TDP2O95551 362 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 FDPSP14324 419 aaKnown RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 ERVK-21P61565 698 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 SP7Q8TDD2 431 aaPredicted RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 WASF1Q92558 559 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 GTF3C6Q969F1 213 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 TGS1Q96RS0 853 aaKnown RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 TEKT3Q9BXF9 490 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 CELF4Q9BZC1 486 aaKnown RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 AGO3Q9H9G7 860 aaKnown RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 DISC1Q9NRI5 854 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 ORC3Q9UBD5 711 aaPredicted RBP19.28■□□□□ 0.68
SQLE-205ENST00000521232 SAMM50Q9Y512 469 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 TRPV2Q9Y5S1 764 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 MTCH2Q9Y6C9 303 aa19.28■□□□□ 0.68
SQLE-205ENST00000521232 M0QZ92 97 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 ENPP3O14638 875 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 GAS7O60861 476 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 DTNBO60941 627 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 PSMD10O75832 226 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 LARGE1O95461 756 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 SFNP31947 248 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 TMEM62Q0P6H9 643 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 CCDC85BQ15834 202 aaPredicted RBP19.27■□□□□ 0.68
SQLE-205ENST00000521232 LRCH2Q5VUJ6 765 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 CKAP2LQ8IYA6 745 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 KIAA0319LQ8IZA0 1049 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 GJB4Q9NTQ9 266 aa19.27■□□□□ 0.68
SQLE-205ENST00000521232 XIRP2A4UGR9 3374 aa19.27■□□□□ 0.67
SQLE-205ENST00000521232 TTC3P53804 2025 aa19.27■□□□□ 0.67
SQLE-205ENST00000521232 IGSF9BQ9UPX0 1349 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 GTPBP6O43824 516 aaPredicted RBP19.26■□□□□ 0.67
SQLE-205ENST00000521232 LPXNO60711 386 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms