RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 BRINP1O60477 761 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 BPIP17213 487 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 PTGS1P23219 599 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 AOAHP28039 575 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 SDHAP31040 664 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 TMPRSS15P98073 1019 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 STAT4Q14765 748 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 HDGFL2Q7Z4V5 671 aaPredicted RBP7.15□□□□□ -1.26
SKP1-208ENST00000521216 DDX42Q86XP3 938 aaKnown RBP eCLIP7.15□□□□□ -1.26
SKP1-208ENST00000521216 TTLL6Q8N841 843 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 WDR48Q8TAF3 677 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 WDR66Q8TBY9 1149 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 IGDCC4Q8TDY8 1250 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 FNIP1Q8TF40 1166 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 GPATCH3Q96I76 525 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 IRF2BPLQ9H1B7 796 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 DLL4Q9NR61 685 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.26
SKP1-208ENST00000521216 hCG_2014768A0A024R1R8 64 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 RAB11FIP3O75154 756 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 FBXO21O94952 628 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 C8AP07357 584 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 ADAM9Q13443 819 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 VMACQ2NL98 169 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 LHFPL2Q6ZUX7 228 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 RTF1Q92541 710 aaKnown RBP7.14□□□□□ -1.27
SKP1-208ENST00000521216 TACO1Q9BSH4 297 aaKnown RBP7.14□□□□□ -1.27
SKP1-208ENST00000521216 INCENPQ9NQS7 918 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 BTBD7Q9P203 1132 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 ZFP69BQ9UJL9 534 aa7.14□□□□□ -1.27
SKP1-208ENST00000521216 TGM5O43548 720 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 EYA4O95677 639 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 POU3F3P20264 500 aaPredicted RBP7.13□□□□□ -1.27
SKP1-208ENST00000521216 AFF3P51826 1226 aaKnown RBP7.13□□□□□ -1.27
SKP1-208ENST00000521216 DDB1Q16531 1140 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 BROXQ5VW32 411 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 IQSEC1Q6DN90 963 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 TTLL7Q6ZT98 887 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 ADGRG2Q8IZP9 1017 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 STPG3Q8N7X2 389 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 LINC00482Q8N8I6 264 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 DTX3Q8N9I9 347 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 SLC5A5Q92911 643 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 SCYL1Q96KG9 808 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 APOBEC2Q9Y235 224 aaKnown RBP7.13□□□□□ -1.27
SKP1-208ENST00000521216 ASB1Q9Y576 335 aa7.13□□□□□ -1.27
SKP1-208ENST00000521216 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 APOL3O95236 402 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 CDK11BP21127 795 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 FNTBP49356 437 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 EVA1CP58658 441 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 ANAPC15P60006 121 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 SMAD3P84022 425 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 SMAD2Q15796 467 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 CIAPIN1Q6FI81 312 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 ESRP1Q6NXG1 681 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 CILP2Q8IUL8 1156 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 ZNF526Q8TF50 670 aaPredicted RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 TUBGCP5Q96RT8 1024 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 MS4A5Q9H3V2 200 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 GALNT8Q9NY28 637 aa7.12□□□□□ -1.27
SKP1-208ENST00000521216 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
SKP1-208ENST00000521216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.11□□□□□ -1.27
SKP1-208ENST00000521216 CYP7B1O75881 506 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 CD40P25942 277 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 LSP1P33241 339 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 THBS2P35442 1172 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 CDKN1CP49918 316 aaPredicted RBP7.11□□□□□ -1.27
SKP1-208ENST00000521216 HTRA3P83110 453 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 SLC6A3Q01959 620 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 RTP5Q14D33 572 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 TRMT10BQ6PF06 316 aaKnown RBP7.11□□□□□ -1.27
SKP1-208ENST00000521216 LRSAM1Q6UWE0 723 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 NME9Q86XW9 330 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 ZZZ3Q8IYH5 903 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 E2F7Q96AV8 911 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 WRNIP1Q96S55 665 aa7.11□□□□□ -1.27
SKP1-208ENST00000521216 SPATA6Q9NWH7 488 aaPredicted RBP7.11□□□□□ -1.27
SKP1-208ENST00000521216 NOC2LQ9Y3T9 749 aaKnown RBP7.11□□□□□ -1.27
SKP1-208ENST00000521216 A0A1B0GTL3 188 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
SKP1-208ENST00000521216 LCHNA4D1U4 455 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 GPR39O43194 453 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 ULK1O75385 1050 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 IL18BPO95998 194 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 ECE1P42892 770 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 IGBP1P78318 339 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 EPHA7Q15375 998 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 TERF2Q15554 542 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 TTC38Q5R3I4 469 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 PRAMEF9Q5VWM5 478 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 RNF219Q5W0B1 726 aaPredicted RBP7.1□□□□□ -1.27
SKP1-208ENST00000521216 SAPCD2Q86UD0 394 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 RTN4RL1Q86UN2 441 aaPredicted RBP7.1□□□□□ -1.27
SKP1-208ENST00000521216 C7orf31Q8N865 590 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 PRPF38AQ8NAV1 312 aaKnown RBP7.1□□□□□ -1.27
SKP1-208ENST00000521216 CALML6Q8TD86 181 aa7.1□□□□□ -1.27
SKP1-208ENST00000521216 COG1Q8WTW3 980 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms