RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.56□□□□□ -1.36
CLK4-207ENST00000520909 TCRBV5S4A2TA0A5A2 114 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 FAM90A27PA6NNH2 459 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 ARHGAP6O43182 974 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 HMGCRP04035 888 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 FGRP09769 529 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 C1SP09871 688 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 HIBADHP31937 336 aaKnown RBP6.56□□□□□ -1.36
CLK4-207ENST00000520909 PAK1Q13153 545 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 NFYCQ13952 458 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 MSL2Q9HCI7 577 aa6.56□□□□□ -1.36
CLK4-207ENST00000520909 MATN2O00339 956 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 ACRV1P26436 265 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 KCNQ1P51787 676 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 INHBCP55103 352 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 GPR19Q15760 415 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 LRRC47Q8N1G4 583 aaKnown RBP6.55□□□□□ -1.36
CLK4-207ENST00000520909 ZNF808Q8N4W9 903 aaPredicted RBP6.55□□□□□ -1.36
CLK4-207ENST00000520909 NEU4Q8WWR8 484 aaPredicted RBP6.55□□□□□ -1.36
CLK4-207ENST00000520909 INCENPQ9NQS7 918 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 CATSPERZQ9NTU4 200 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 GALNT8Q9NY28 637 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 SRPK3Q9UPE1 567 aa6.55□□□□□ -1.36
CLK4-207ENST00000520909 PTGS1P23219 599 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 GJA4P35212 333 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 HHEXQ03014 270 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 FOXL1Q12952 345 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 DUSP8Q13202 625 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 TBR1Q16650 682 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 ASXL2Q76L83 1435 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 ST13P5Q8NFI4 369 aaPredicted RBP6.54□□□□□ -1.36
CLK4-207ENST00000520909 WDR48Q8TAF3 677 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 CACTINQ8WUQ7 758 aaKnown RBP6.54□□□□□ -1.36
CLK4-207ENST00000520909 AURKAIP1Q9NWT8 199 aaPredicted RBP6.54□□□□□ -1.36
CLK4-207ENST00000520909 PLA2G3Q9NZ20 509 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 ATP23Q9Y6H3 246 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 CECR2Q9BXF3 1484 aa6.54□□□□□ -1.36
CLK4-207ENST00000520909 A0A087X1B8 175 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 MSX2P35548 267 aaPredicted RBP6.53□□□□□ -1.36
CLK4-207ENST00000520909 ADCY8P40145 1251 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 IL13RA1P78552 427 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 TUBA3CQ13748 450 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 EIF4HQ15056 248 aaKnown RBP6.53□□□□□ -1.36
CLK4-207ENST00000520909 TUBA3EQ6PEY2 450 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 LARP4Q71RC2 724 aaKnown RBP eCLIP6.53□□□□□ -1.36
CLK4-207ENST00000520909 MCF2L2Q86YR7 1114 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 WNK4Q96J92 1243 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 NELFAQ9H3P2 528 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 TRAF6Q9Y4K3 522 aa6.53□□□□□ -1.36
CLK4-207ENST00000520909 AQP7O14520 342 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 U2SURPO15042 1029 aaKnown RBP6.52□□□□□ -1.37
CLK4-207ENST00000520909 ADH4P08319 380 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 DNAJA1P31689 397 aaKnown RBP6.52□□□□□ -1.37
CLK4-207ENST00000520909 MEOX1P50221 254 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 YOD1Q5VVQ6 348 aaPredicted RBP6.52□□□□□ -1.37
CLK4-207ENST00000520909 OTOP2Q7RTS6 562 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 OSTM1Q86WC4 334 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 FBXW5Q969U6 566 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 KIAA1683Q9H0B3 1180 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 TLR9Q9NR96 1032 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 CDC42EP3Q9UKI2 254 aa6.52□□□□□ -1.37
CLK4-207ENST00000520909 WNT9AO14904 365 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 MAKP20794 623 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 GRM7Q14831 915 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 PCOLCEQ15113 449 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 STILQ15468 1287 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 MTDHQ86UE4 582 aaKnown RBP6.51□□□□□ -1.37
CLK4-207ENST00000520909 ZNF575Q86XF7 245 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 CFHR4Q92496 578 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 BTBD2Q9BX70 525 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 OR10A2Q9H208 303 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 ZNF703Q9H7S9 590 aaPredicted RBP6.51□□□□□ -1.37
CLK4-207ENST00000520909 MMRN2Q9H8L6 949 aa6.51□□□□□ -1.37
CLK4-207ENST00000520909 MAN2B1O00754 1011 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 GSTA4O15217 222 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 KLF4O43474 513 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 PDE6AP16499 860 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 KRT15P19012 456 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 AOAHP28039 575 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 ST5P78524 1137 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 CRY1Q16526 586 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 FIGNQ5HY92 759 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 TRIM68Q6AZZ1 485 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 C16orf59Q7L2K0 433 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 MAMDC2Q7Z304 686 aaPredicted RBP6.5□□□□□ -1.37
CLK4-207ENST00000520909 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 ADGRE4PQ86SQ3 457 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 PTRH1Q86Y79 214 aaKnown RBP6.5□□□□□ -1.37
CLK4-207ENST00000520909 RTKN2Q8IZC4 609 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 THEMISQ8N1K5 641 aaPredicted RBP6.5□□□□□ -1.37
CLK4-207ENST00000520909 PCDHA8Q9Y5H6 950 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
CLK4-207ENST00000520909 A0A0G2JNJ9 132 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 PRAMEF25A6NGN4 478 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms