RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 GLG1Q92896 1179 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 AP5M1Q9H0R1 490 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 BLZF1Q9H2G9 400 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 RMND1Q9NWS8 449 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 WRAP73Q9P2S5 460 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 SEPT9Q9UHD8 586 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 DBR1Q9UK59 544 aaKnown RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 IGKV6D-21A0A0A0MT36 114 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 GSTTP1A0A1W2PQM5 241 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 MYMKA6NI61 221 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TBCAO75347 108 aaKnown RBP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 LGR5O75473 907 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 MMP3P08254 477 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 CNGA1P29973 690 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 SLC26A2P50443 739 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 SLC12A3P55017 1021 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 PSMC6P62333 389 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TYRO3Q06418 890 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 DPYDQ12882 1025 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 CUL4BQ13620 913 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 XKR3Q5GH77 459 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 LRSAM1Q6UWE0 723 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 SYT2Q8N9I0 419 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TRIML1Q8N9V2 468 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 AFG1LQ8WV93 481 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 C7orf25Q9BPX7 421 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 SMARCAD1Q9H4L7 1026 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 ANO10Q9NW15 660 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 KCND2Q9NZV8 630 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TUBE1Q9UJT0 475 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 GNEQ9Y223 722 aaKnown RBP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 Q9Y3F1 56 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 TELO2Q9Y4R8 837 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 PCDHA5Q9Y5H7 936 aa9.97□□□□□ -0.81
CSMD1-208ENST00000520561 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-208ENST00000520561 A0A087WWV3 80 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 BIN1O00499 593 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 SEPT4O43236 478 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DYNC1LI2O43237 492 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 ADCY6O43306 1168 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 ZNF862O60290 1169 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DUSP11O75319 330 aaKnown RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 RPN1P04843 607 aaKnown RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 INHAP05111 366 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 LGALS2P05162 132 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 RARBP10826 455 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 IDEP14735 1019 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CYP11B2P19099 503 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 PTGS1P23219 599 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CASP1P29466 404 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 GRK4P32298 578 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 RARRES1P49788 294 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CPT1AP50416 773 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CACNB2Q08289 660 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DGKDQ16760 1214 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 XKR9Q5GH70 373 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 NT5DC1Q5TFE4 455 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 PLA2G4FQ68DD2 849 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CNNM4Q6P4Q7 775 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 UNC13DQ70J99 1090 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DYMQ7RTS9 669 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 PLPPR4Q7Z2D5 763 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 TRMT1LQ7Z2T5 733 aaKnown RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CCDC65Q8IXS2 484 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DNAJC5GQ8N7S2 189 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 TRPV1Q8NER1 839 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 SPATA20Q8TB22 786 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DDX12PQ92771 950 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 CEP170P1Q96L14 293 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 MTRQ99707 1265 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 GTPBP4Q9BZE4 634 aaKnown RBP9.96□□□□□ -0.82
CSMD1-208ENST00000520561 NRBP2Q9NSY0 501 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 ERAP1Q9NZ08 941 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 PTCH2Q9Y6C5 1203 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 ARID2Q68CP9 1835 aa9.96□□□□□ -0.82
CSMD1-208ENST00000520561 PVALEFA0A1B0GWK0 134 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 USO1O60763 962 aaKnown RBP9.95□□□□□ -0.82
CSMD1-208ENST00000520561 PPFIA4O75335 1185 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 FAM13AO94988 1023 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 ZNF286BP0CG31 522 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 HOXD8P13378 290 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-208ENST00000520561 MARK3P27448 753 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 SARSP49591 514 aaKnown RBP9.95□□□□□ -0.82
CSMD1-208ENST00000520561 NLRP12P59046 1061 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 TRIM32Q13049 653 aa9.95□□□□□ -0.82
CSMD1-208ENST00000520561 KCNB1Q14721 858 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms