RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 TRIM21P19474 475 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CCNE1P24864 410 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 GNA11P29992 359 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 ARHGAP25P42331 645 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PRCPP42785 496 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 TNNT3P45378 269 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 MTIF2P46199 727 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 AARSP49588 968 aaKnown RBP eCLIP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 USP14P54578 494 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 HNRNPH2P55795 449 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 ERVK-9P63128 1117 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 AMPD2Q01433 879 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 KIF5AQ12840 1032 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CAMK2BQ13554 666 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 MCM6Q14566 821 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CASP8Q14790 479 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 NPY5RQ15761 445 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 MEA1Q16626 185 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 LRRC26Q2I0M4 334 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CCDC122Q5T0U0 273 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 GPR142Q7Z601 462 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PLEKHH3Q7Z736 793 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 TDHQ8IZJ6 230 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CSGALNACT2Q8N6G5 542 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 TRIM58Q8NG06 486 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 SOCS4Q8WXH5 440 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 P2RX5Q93086 422 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CALML4Q96GE6 196 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 DHX36Q9H2U1 1008 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 PDE11AQ9HCR9 933 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 C6orf50Q9HD87 102 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 RBPJLQ9UBG7 517 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 MORF4L1Q9UBU8 362 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 OGDHLQ9ULD0 1010 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 L1RE1Q9UN81 338 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
CTNNA1-223ENST00000520520 COL2A1P02458 1487 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 UNC80Q8N2C7 3258 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 A6NNZ2 444 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 C19orf81C9J6K1 198 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TULP2O00295 520 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 CLSTN1O94985 981 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 OR52Z1P0C646 297 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 RHOXF2BP0C7M4 288 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 CAPN2P17655 700 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 MAPK4P31152 587 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 RGS2P41220 211 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 ITIH3Q06033 890 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TMEM266Q2M3C6 531 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TUBB8Q3ZCM7 444 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 EARS2Q5JPH6 523 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 PAPD7Q5XG87 772 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 LHX8Q68G74 356 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 FOXR2Q6PJQ5 311 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 CABP7Q86V35 215 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 AFAP1L1Q8TED9 768 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 PNKPQ96T60 521 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TSG101Q99816 390 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 RHOXF2Q9BQY4 288 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TUBGCP2Q9BSJ2 902 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 SPZ1Q9BXG8 430 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 SENP6Q9GZR1 1112 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 NUCKS1Q9H1E3 243 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 ABCB6Q9NP58 842 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 DCP1AQ9NPI6 582 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 KBTBD4Q9NVX7 518 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 ADAM21Q9UKJ8 722 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 GUCA1BQ9UMX6 200 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 MYH8P13535 1937 aa9.54□□□□□ -0.88
CTNNA1-223ENST00000520520 TTC26A0AVF1 554 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 SLC26A4O43511 780 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 TSPY3P0CV98 308 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 TSPY8P0CW00 308 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 CASP1P29466 404 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 BMP8BP34820 402 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 VAV2P52735 878 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 VSNL1P62760 191 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 ASIC1P78348 528 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 HEATR3Q7Z4Q2 680 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 CNOT6LQ96LI5 555 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 ERGIC2Q96RQ1 377 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 NAP1L4Q99733 375 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms