RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 SLFN11Q7Z7L1 901 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 CNOT10Q9H9A5 744 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 KIAA1024Q9UPX6 916 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 TRAF3IP3Q9Y228 551 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 E9PMD0 336 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 RASSF9O75901 435 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 GFPT2O94808 682 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 TM4SF1P30408 202 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 EIF3BP55884 814 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 PPP2R5EQ16537 467 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 UBE2SQ16763 222 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 EXOC3L4Q17RC7 722 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 TMC3Q7Z5M5 1100 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 DDX47Q9H0S4 455 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 CALUO43852 315 aaPredicted RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 XRCC5P13010 732 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 GRAPQ13588 217 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 DPY19L2P1Q6NXN4 242 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 AP1M1Q9BXS5 423 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 UTP11Q9Y3A2 253 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 POTECB2RU33 542 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 SLC16A3O15427 465 aaKnown RBP13.05□□□□□ -0.32
CPEB4-207ENST00000519835 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 CCDC114Q96M63 670 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
CPEB4-207ENST00000519835 F8VZ95 297 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 ACTN1P12814 892 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 SLC9A1P19634 815 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 PON1P27169 355 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 RHBDL3P58872 404 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 CLUL1Q15846 466 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 SLFN12Q8IYM2 578 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 PSMD1Q99460 953 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 NCANO14594 1321 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 GAKO14976 1311 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 IGKV6D-41A0A0C4DH26 115 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 DAPK3O43293 454 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 FERP16591 822 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 SLC12A3P55017 1021 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 JAM2P57087 298 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 KRT71Q3SY84 523 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 TATDN2Q93075 761 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 HES6Q96HZ4 224 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 SEC16BQ96JE7 1060 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 NOVA2Q9UNW9 492 aaKnown RBP13.04□□□□□ -0.32
CPEB4-207ENST00000519835 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
CPEB4-207ENST00000519835 MYO3BQ8WXR4 1341 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 NPHP3-ACAD11A0A0J9YXS1 232 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 PDXKO00764 312 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 TTLL1O95922 423 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
CPEB4-207ENST00000519835 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
CPEB4-207ENST00000519835 EPHA7Q15375 998 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 LACTB2Q53H82 288 aaPredicted RBP13.03□□□□□ -0.32
CPEB4-207ENST00000519835 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
CPEB4-207ENST00000519835 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms