RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 KRT76Q01546 638 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 PLCB4Q15147 1175 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 PAN2Q504Q3 1202 aaKnown RBP18.08■□□□□ 0.48
VPS37A-204ENST00000519381 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 MARCH8Q5T0T0 291 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 SPOUT1Q5T280 376 aaKnown RBP18.08■□□□□ 0.48
VPS37A-204ENST00000519381 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
VPS37A-204ENST00000519381 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 ZBTB10Q96DT7 871 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 UIMC1Q96RL1 719 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 PLVAPQ9BX97 442 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 AGO4Q9HCK5 861 aaKnown RBP18.08■□□□□ 0.48
VPS37A-204ENST00000519381 BARHL2Q9NY43 387 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 PCDHA2Q9Y5H9 948 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 SQORQ9Y6N5 450 aa18.08■□□□□ 0.48
VPS37A-204ENST00000519381 CCDC196A0A1B0GTZ2 297 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 STXBP3O00186 592 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 GRM6O15303 877 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 GPR37L1O60883 481 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 ARP10275 920 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 SCG2P13521 617 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 SREBF1P36956 1147 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 NME8Q8N427 588 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 PCYT2Q99447 389 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 POP1Q99575 1024 aaKnown RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 CELF4Q9BZC1 486 aaKnown RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 IGFLR1Q9H665 355 aa18.07■□□□□ 0.48
VPS37A-204ENST00000519381 AGO3Q9H9G7 860 aaKnown RBP18.07■□□□□ 0.48
VPS37A-204ENST00000519381 IGSF9BQ9UPX0 1349 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 SMIM35A0A1B0GVV1 85 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 DENND3A2RUS2 1198 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 HBP1O60381 514 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 DGKIO75912 1065 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 MMP1P03956 469 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 NDUFV1P49821 464 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 METAP2P50579 478 aaKnown RBP eCLIP18.06■□□□□ 0.48
VPS37A-204ENST00000519381 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
VPS37A-204ENST00000519381 NFX1Q12986 1120 aaKnown RBP18.06■□□□□ 0.48
VPS37A-204ENST00000519381 CLUL1Q15846 466 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 MIS18BP1Q6P0N0 1132 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 PDXDC2PQ6P474 469 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 KHSRPQ92945 711 aaKnown RBP eCLIP18.06■□□□□ 0.48
VPS37A-204ENST00000519381 UPF3BQ9BZI7 483 aaKnown RBP18.06■□□□□ 0.48
VPS37A-204ENST00000519381 CD320Q9NPF0 282 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 PRKAG3Q9UGI9 489 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 PADI3Q9ULW8 664 aa18.06■□□□□ 0.48
VPS37A-204ENST00000519381 TTC3P53804 2025 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 CDC45O75419 566 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 SETQ01105 290 aaPredicted RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 NAALADL2Q58DX5 795 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 TYW1BQ6NUM6 668 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 MTHFD1LQ6UB35 978 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 ZNF689Q96CS4 500 aaPredicted RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 RC3H2Q9HBD1 1191 aaKnown RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 ALG13Q9NP73 1137 aaKnown RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 TMEM260Q9NX78 707 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 BRPF3Q9ULD4 1205 aa18.05■□□□□ 0.48
VPS37A-204ENST00000519381 MRPL42Q9Y6G3 142 aaKnown RBP18.05■□□□□ 0.48
VPS37A-204ENST00000519381 MEIS1O00470 390 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 DCXO43602 365 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 RPS6KA5O75582 802 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 KLRC1P26715 233 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 RCAN1P53805 252 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 HYAL1Q12794 435 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 TMEM266Q2M3C6 531 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 ATP8B4Q8TF62 1192 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 LINC01599Q8WXQ3 324 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 P2RX5Q93086 422 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 ZNF577Q9BSK1 485 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 AAASQ9NRG9 546 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 ARIH1Q9Y4X5 557 aaPredicted RBP18.04■□□□□ 0.48
VPS37A-204ENST00000519381 SAMM50Q9Y512 469 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 PCDHB7Q9Y5E2 793 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 COL1A2P08123 1366 aa18.04■□□□□ 0.48
VPS37A-204ENST00000519381 PRR33A8MZF0 331 aa18.03■□□□□ 0.48
VPS37A-204ENST00000519381 ZNF484Q5JVG2 852 aa18.03■□□□□ 0.48
VPS37A-204ENST00000519381 ADHFE1Q8IWW8 467 aa18.03■□□□□ 0.48
VPS37A-204ENST00000519381 REXO1Q8N1G1 1221 aaKnown RBP18.03■□□□□ 0.48
VPS37A-204ENST00000519381 PLAGL2Q9UPG8 496 aa18.03■□□□□ 0.48
VPS37A-204ENST00000519381 PCDHB12Q9Y5F1 795 aa18.03■□□□□ 0.48
VPS37A-204ENST00000519381 KDM3AQ9Y4C1 1321 aa18.02■□□□□ 0.48
VPS37A-204ENST00000519381 LOXHD1Q8IVV2 1947 aa18.02■□□□□ 0.48
VPS37A-204ENST00000519381 MYO7AQ13402 2215 aa18.02■□□□□ 0.48
VPS37A-204ENST00000519381 IPO5O00410 1097 aaKnown RBP18.02■□□□□ 0.48
VPS37A-204ENST00000519381 GPR182O15218 404 aa18.02■□□□□ 0.48
VPS37A-204ENST00000519381 GNA11P29992 359 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms