RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 STK24Q9Y6E0 443 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 WDR81Q562E7 1941 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 TREHO43280 583 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 ATP2C1P98194 919 aaPredicted RBP25.36■■□□□ 1.65
SKP1-206ENST00000519321 RBL2Q08999 1139 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 HIC1Q14526 733 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 MFSD5Q6N075 450 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 TAF2Q6P1X5 1199 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 TMEM199Q8N511 208 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 ERMNQ8TAM6 284 aa25.36■■□□□ 1.65
SKP1-206ENST00000519321 MBLAC1A4D2B0 266 aaPredicted RBP25.35■■□□□ 1.65
SKP1-206ENST00000519321 ZNF862O60290 1169 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 CAND2O75155 1236 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 IGBP1P78318 339 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 PDIA5Q14554 519 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 UGCGQ16739 394 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 ARL6IP4Q66PJ3 421 aaKnown RBP25.35■■□□□ 1.65
SKP1-206ENST00000519321 DTHD1Q6ZMT9 781 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 BADQ92934 168 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 EIF2AK1Q9BQI3 630 aaKnown RBP25.35■■□□□ 1.65
SKP1-206ENST00000519321 ZSWIM4Q9H7M6 989 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 LTBP2Q14767 1821 aa25.35■■□□□ 1.65
SKP1-206ENST00000519321 DNAH12Q6ZR08 3092 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 POTEMA6NI47 508 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 ZSCAN22P10073 491 aaPredicted RBP25.34■■□□□ 1.65
SKP1-206ENST00000519321 ITGB8P26012 769 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 MAGEA10P43363 369 aaPredicted RBP25.34■■□□□ 1.65
SKP1-206ENST00000519321 RSPH3Q86UC2 560 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 C4orf19Q8IY42 314 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 LXNQ9BS40 222 aa25.34■■□□□ 1.65
SKP1-206ENST00000519321 PARNO95453 639 aaKnown RBP25.33■■□□□ 1.65
SKP1-206ENST00000519321 CYP2C18P33260 490 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 MDM2Q00987 491 aaPredicted RBP25.33■■□□□ 1.65
SKP1-206ENST00000519321 MARCH8Q5T0T0 291 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 TRMT1LQ7Z2T5 733 aaKnown RBP25.33■■□□□ 1.65
SKP1-206ENST00000519321 DYDC2Q96IM9 177 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 GDF15Q99988 308 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 HSD17B14Q9BPX1 270 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 NIFKQ9BYG3 293 aaKnown RBP25.33■■□□□ 1.65
SKP1-206ENST00000519321 PCDHA2Q9Y5H9 948 aa25.33■■□□□ 1.65
SKP1-206ENST00000519321 TRIP12Q14669 1992 aaPredicted RBP25.33■■□□□ 1.64
SKP1-206ENST00000519321 MAGEB2O15479 319 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 SLITRK3O94933 977 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 SELPP16109 830 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 FPGSQ05932 587 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 PPIGQ13427 754 aaKnown RBP eCLIP25.32■■□□□ 1.64
SKP1-206ENST00000519321 SF3A1Q15459 793 aaKnown RBP25.32■■□□□ 1.64
SKP1-206ENST00000519321 HAUS3Q68CZ6 603 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 MTHFD1LQ6UB35 978 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 OTUD6AQ7L8S5 288 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 RPAINQ86UA6 219 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 TPH2Q8IWU9 490 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 IGSF22Q8N9C0 903 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 DHX38Q92620 1227 aaKnown RBP25.32■■□□□ 1.64
SKP1-206ENST00000519321 TUFT1Q9NNX1 390 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 RGL1Q9NZL6 768 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 LRWD1Q9UFC0 647 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 SEPT9Q9UHD8 586 aaPredicted RBP25.32■■□□□ 1.64
SKP1-206ENST00000519321 PPME1Q9Y570 386 aa25.32■■□□□ 1.64
SKP1-206ENST00000519321 DDX11L8A8MPP1 907 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 LYPLA2O95372 231 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 F13A1P00488 732 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 CKBP12277 381 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 MUTP22033 750 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 BMP8BP34820 402 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 RFC2P35250 354 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 THPOP40225 353 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 CYP4A11Q02928 519 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 TRIM71Q2Q1W2 868 aaKnown RBP25.31■■□□□ 1.64
SKP1-206ENST00000519321 TRAPPC12Q8WVT3 735 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 ZNF396Q96N95 335 aaPredicted RBP25.31■■□□□ 1.64
SKP1-206ENST00000519321 POLR3CQ9BUI4 534 aaPredicted RBP25.31■■□□□ 1.64
SKP1-206ENST00000519321 UMODL1Q5DID0 1318 aa25.31■■□□□ 1.64
SKP1-206ENST00000519321 SMIM35A0A1B0GVV1 85 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 ZBTB42B2RXF5 422 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 IQCF3P0C7M6 154 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 KLRC1P26715 233 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 ANP32AP39687 249 aaKnown RBP25.3■■□□□ 1.64
SKP1-206ENST00000519321 CCL23P55773 120 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 CTTNQ14247 550 aaKnown RBP25.3■■□□□ 1.64
SKP1-206ENST00000519321 LRRC8DQ7L1W4 858 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 EXOC8Q8IYI6 725 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 RPUSD2Q8IZ73 545 aaKnown RBP25.3■■□□□ 1.64
SKP1-206ENST00000519321 WNT8AQ9H1J5 351 aa25.3■■□□□ 1.64
SKP1-206ENST00000519321 STBD1O95210 358 aa25.29■■□□□ 1.64
SKP1-206ENST00000519321 RPA1P27694 616 aa25.29■■□□□ 1.64
SKP1-206ENST00000519321 YWHABP31946 246 aaKnown RBP25.29■■□□□ 1.64
SKP1-206ENST00000519321 FAM173BQ6P4H8 233 aa25.29■■□□□ 1.64
SKP1-206ENST00000519321 NME8Q8N427 588 aa25.29■■□□□ 1.64
SKP1-206ENST00000519321 JPH2Q9BR39 696 aaPredicted RBP25.29■■□□□ 1.64
SKP1-206ENST00000519321 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
SKP1-206ENST00000519321 C22orf31O95567 290 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 PFKMP08237 780 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 XRCC6P12956 609 aaKnown RBP eCLIP25.28■■□□□ 1.64
SKP1-206ENST00000519321 TBC1D8BQ0IIM8 1120 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 TARBP2Q15633 366 aaKnown RBP25.28■■□□□ 1.64
SKP1-206ENST00000519321 MTERF2Q49AM1 385 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 KRT79Q5XKE5 535 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 RUFY4Q6ZNE9 571 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 ANO5Q75V66 913 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms