RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ATP8B4Q8TF62 1192 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 HAS1Q92839 578 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
VEGFA-219ENST00000518824 TEKT3Q9BXF9 490 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 FAM49AQ9H0Q0 323 aaPredicted RBP15.05■□□□□ -0
VEGFA-219ENST00000518824 DISC1Q9NRI5 854 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 PCDHA10Q9Y5I2 948 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 MAFBQ9Y5Q3 323 aaPredicted RBP15.05■□□□□ -0
VEGFA-219ENST00000518824 SLC4A7Q9Y6M7 1214 aa15.05■□□□□ -0
VEGFA-219ENST00000518824 MICAL3Q7RTP6 2002 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 IGSF9BQ9UPX0 1349 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 TMEM150BA6NC51 233 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 CCNT1O60563 726 aaKnown RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 PSAPP07602 524 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 ATP2A2P16615 1042 aaKnown RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 WDR5P61964 334 aaKnown RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 FAM26DQ5JW98 314 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 ZNF697Q5TEC3 545 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 FAM160B1Q5W0V3 765 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 CNKSR3Q6P9H4 555 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 MTHFD1LQ6UB35 978 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.04■□□□□ -02e-35■■■■□ 25.1
VEGFA-219ENST00000518824 SPRED2Q7Z698 418 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 TMX3Q96JJ7 454 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 RIT2Q99578 217 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 BACH2Q9BYV9 841 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 NKX2-4Q9H2Z4 354 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 KCNMB3Q9NPA1 279 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 SH2B1Q9NRF2 756 aaPredicted RBP15.04■□□□□ -0
VEGFA-219ENST00000518824 VAV3Q9UKW4 847 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 SAMM50Q9Y512 469 aa15.04■□□□□ -0
VEGFA-219ENST00000518824 RRN3P2A6NIE6 340 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 WDR64B1ANS9 1081 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 KIF28PB7ZC32 967 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 HBP1O60381 514 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 STBD1O95210 358 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 ACTN1P12814 892 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 KLRC1P26715 233 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 GRIN2CQ14957 1233 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 PLEKHG4Q58EX7 1191 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 PPP4R3AQ6IN85 833 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
VEGFA-219ENST00000518824 TIFAQ96CG3 184 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 C8orf76Q96K31 380 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 CDY2AQ9Y6F7 541 aa15.03■□□□□ -0
VEGFA-219ENST00000518824 GHRP10912 638 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 LPIN1Q14693 890 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 MIER3Q7Z3K6 550 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 RPAINQ86UA6 219 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 CKAP2LQ8IYA6 745 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 PPP1R16BQ96T49 567 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
VEGFA-219ENST00000518824 SH2D3AQ9BRG2 576 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 MTIF3Q9H2K0 278 aaKnown RBP15.02■□□□□ -0
VEGFA-219ENST00000518824 AGO3Q9H9G7 860 aaKnown RBP15.02■□□□□ -0
VEGFA-219ENST00000518824 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
VEGFA-219ENST00000518824 CDHR5Q9HBB8 845 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 WRAP73Q9P2S5 460 aaPredicted RBP15.02■□□□□ -0
VEGFA-219ENST00000518824 PCDHA2Q9Y5H9 948 aa15.02■□□□□ -0
VEGFA-219ENST00000518824 LCHNA4D1U4 455 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 CAND2O75155 1236 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 C22orf31O95567 290 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 ATP2B1P20020 1258 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 SLC26A2P50443 739 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 MRPS6P82932 125 aaKnown RBP15.01□□□□□ -0.01
VEGFA-219ENST00000518824 PRKCEQ02156 737 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 TRIM29Q14134 588 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 TAF2Q6P1X5 1199 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 HERC6Q8IVU3 1022 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 KIAA0319LQ8IZA0 1049 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 BANK1Q8NDB2 785 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 FBXO18Q8NFZ0 1043 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 BBXQ8WY36 941 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-219ENST00000518824 MYLIPQ8WY64 445 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 TMEM60Q9H2L4 133 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 ZNF576Q9H609 170 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 BRMS1Q9HCU9 246 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 TCEAL9Q9UHQ7 104 aa15.01□□□□□ -0.01
VEGFA-219ENST00000518824 SMIM35A0A1B0GVV1 85 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15□□□□□ -0.01
VEGFA-219ENST00000518824 ST18O60284 1047 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 BAIAP3O94812 1187 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 PARNO95453 639 aaKnown RBP15□□□□□ -0.01
VEGFA-219ENST00000518824 OATP04181 439 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 GCFC2P16383 781 aaKnown RBP15□□□□□ -0.01
VEGFA-219ENST00000518824 JAK3P52333 1124 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
VEGFA-219ENST00000518824 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 NBR1Q14596 966 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 ZNF484Q5JVG2 852 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 FBXO47Q5MNV8 452 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 FAM117BQ6P1L5 589 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 SLC9A7Q96T83 725 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
VEGFA-219ENST00000518824 COL1A2P08123 1366 aa14.99□□□□□ -0.01
VEGFA-219ENST00000518824 CDH23Q9H251 3354 aa14.99□□□□□ -0.01
VEGFA-219ENST00000518824 ABHD14A-ACY1A0A1B0GW23 586 aa14.99□□□□□ -0.01
VEGFA-219ENST00000518824 CA3P07451 260 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms