RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPATCH2Q9NW75 528 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 RIPOR2Q9Y4F9 1068 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 NPFFR2Q9Y5X5 522 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZNF541Q9H0D2 1346 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 C2orf71A6NGG8 1288 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GNAT3A8MTJ3 354 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 ARVCFO00192 962 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MYO1BO43795 1136 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PRAMEF1O95521 474 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 EOMESO95936 686 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 F2P00734 622 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GYS1P13807 737 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 BMP8BP34820 402 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GTF2A2P52657 109 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 HUNKP57058 714 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 IL2P60568 153 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 KIF23Q02241 960 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PIN1Q13526 163 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MTMR1Q13613 665 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 ARHGAP44Q17R89 818 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CYP27C1Q4G0S4 372 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 SYDE2Q5VT97 1194 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 IQSEC1Q6DN90 963 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 RCSD1Q6JBY9 416 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MYO1HQ8N1T3 1032 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 BEND7Q8N7W2 519 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 FBLIM1Q8WUP2 373 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PHF20Q9BVI0 1012 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 DUSP23Q9BVJ7 150 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CELF4Q9BZC1 486 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 LAMA2P24043 3122 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 FER1L6Q2WGJ9 1857 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CENPFP49454 3210 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CNTNAP5Q8WYK1 1306 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DLEC1Q9Y238 1755 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CACNA1BQ00975 2339 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BLACEA4D250 179 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 H0Y8X5 98 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 K7ESF4 209 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CBX4O00257 560 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 VAMP4O75379 141 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 FBXO21O94952 628 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GDF11O95390 407 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 MAP4K4O95819 1239 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CD3EP07766 207 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF865P0CJ78 1059 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BMP3P12645 472 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 LSSP48449 732 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 OS9Q13438 667 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SF1Q15637 639 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SEPT7Q16181 437 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DPY19L1Q2PZI1 675 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 NXNQ6DKJ4 435 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SEZ6L2Q6UXD5 910 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 C2CD5Q86YS7 1000 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMEM151AQ8N4L1 468 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 KREMEN2Q8NCW0 462 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DIO2Q92813 273 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF622Q969S3 477 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GPR62Q9BZJ7 368 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CDH19Q9H159 772 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 AASDHPPTQ9NRN7 309 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GABBR1Q9UBS5 961 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 TRAF6Q9Y4K3 522 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 PCDHA9Q9Y5H5 950 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BAHCC1Q9P281 2608 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SSU72P8A0A1W2PR75 194 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 H0YIN7 160 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 WNT9AO14904 365 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 RFPL1O75677 317 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 THBDP07204 575 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 PAMP19021 973 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SESN3P58005 492 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 ST5P78524 1137 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SNW1Q13573 536 aaKnown RBP6□□□□□ -1.45
HMGB1P23-201ENST00000518743 NFKBIBQ15653 356 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SGO2Q562F6 1265 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 LBX2Q6XYB7 198 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMC3Q7Z5M5 1100 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CERS3Q8IU89 383 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM20CQ8IXL6 584 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MFSD4AQ8N468 514 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CNTD1Q8N815 330 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 NPLOC4Q8TAT6 608 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MMP19Q99542 508 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 P2RX7Q99572 595 aaKnown RBP6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MTMR10Q9NXD2 777 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZIM2Q9NZV7 527 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CACNA1SQ13698 1873 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 RPTORQ8N122 1335 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 MUC3AQ02505 3323 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 A0A1W2PPC1 479 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SHTN1A0MZ66 631 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM47E-STBD1D6RA91 191 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms