RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 LIPIQ6XZB0 460 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 FNIP1Q8TF40 1166 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 ASB15Q8WXK1 588 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 E2F7Q96AV8 911 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 GPR101Q96P66 508 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-207ENST00000518569 NOX5Q96PH1 765 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 GBP4Q96PP9 640 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 ELF4Q99607 663 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-207ENST00000518569 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-207ENST00000518569 BTBD7Q9P203 1132 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 ARHGAP28Q9P2N2 729 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 MCM8Q9UJA3 840 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 WASF3Q9UPY6 502 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 COL4A3BPQ9Y5P4 624 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 RASSF10A6NK89 507 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 GOLGA6L22H0YM25 854 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 NEMP1O14524 444 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ULK1O75385 1050 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 PLA2G1BP04054 148 aaKnown RBP5.17□□□□□ -1.58
VPS13B-207ENST00000518569 CHGBP05060 677 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 MMEP08473 750 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ZSCAN22P10073 491 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-207ENST00000518569 SLC9A1P19634 815 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 PI3P19957 117 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 IBSPP21815 317 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-207ENST00000518569 PTGS1P23219 599 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 LINC00310P59036 64 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 SMAD3P84022 425 aaKnown RBP5.17□□□□□ -1.58
VPS13B-207ENST00000518569 AMPD3Q01432 767 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ADCY1Q08828 1119 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ADAM9Q13443 819 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 LRRC32Q14392 662 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 SMAD2Q15796 467 aaKnown RBP5.17□□□□□ -1.58
VPS13B-207ENST00000518569 TMC5Q6UXY8 1006 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 TMEM151BQ8IW70 566 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ZBTB8AQ96BR9 441 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 CLIC6Q96NY7 704 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 SPTLC3Q9NUV7 552 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 GALNT8Q9NY28 637 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 ATP8A1Q9Y2Q0 1164 aa5.17□□□□□ -1.58
VPS13B-207ENST00000518569 NPIPB6E9PJ23 425 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 TGM5O43548 720 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 CD40P25942 277 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 THBS2P35442 1172 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 FAPQ12884 760 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 SKIDA1Q1XH10 827 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 ATP13A4Q4VNC1 1196 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 RNF219Q5W0B1 726 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 SAPCD2Q86UD0 394 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 RTN4RL1Q86UN2 441 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 DDX42Q86XP3 938 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 HIPK4Q8NE63 616 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 ATL2Q8NHH9 583 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 FOXRED1Q96CU9 486 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 PWWP2AQ96N64 755 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 EMC7Q9NPA0 242 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 INCENPQ9NQS7 918 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 TOMM22Q9NS69 142 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 H2AFY2Q9P0M6 372 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 USP36Q9P275 1121 aaKnown RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 ARHGAP20Q9P2F6 1191 aa5.16□□□□□ -1.58
VPS13B-207ENST00000518569 NOP58Q9Y2X3 529 aaKnown RBP5.16□□□□□ -1.58
VPS13B-207ENST00000518569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 SH3D21A4FU49 640 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 GPR39O43194 453 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 MPIG6BO95866 241 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 PTX3P26022 381 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 LSP1P33241 339 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 DLX2Q07687 328 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 STAT4Q14765 748 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 TERF2Q15554 542 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 PRR31Q5SQ13 230 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 DPP8Q6V1X1 898 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 LCNL1Q6ZST4 164 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 CXXC5Q7LFL8 322 aaKnown RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 ZNF610Q8N9Z0 462 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 WDR66Q8TBY9 1149 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 CALML6Q8TD86 181 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 GPATCH3Q96I76 525 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 FOXB1Q99853 325 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 SYT3Q9BQG1 590 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 BTBD2Q9BX70 525 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 FAM126AQ9BYI3 521 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 ZMAT4Q9H898 229 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 SLC39A2Q9NP94 309 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 KCND1Q9NSA2 647 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 SPATA6Q9NWH7 488 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-207ENST00000518569 RBPJLQ9UBG7 517 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 PHLDB1Q86UU1 1377 aa5.15□□□□□ -1.59
VPS13B-207ENST00000518569 PRAMEF22A3QJZ6 481 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 MAFO75444 373 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-207ENST00000518569 IL18BPO95998 194 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 RPL13P26373 211 aaKnown RBP5.14□□□□□ -1.59
VPS13B-207ENST00000518569 ID4P47928 161 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 AFF3P51826 1226 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms