RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 M0R2C6 588 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 PRPF3O43395 683 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 GREM1O60565 184 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 SDSP20132 328 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 GBP2P32456 591 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 MAN1A1P33908 653 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 SOX18P35713 384 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 EIF4A3P38919 411 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 ECE1P42892 770 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TDO2P48775 406 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 RGS19P49795 217 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 EPHB1P54762 984 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 RAPGEF1Q13905 1077 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 KCTD2Q14681 263 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 MCMDC2Q4G0Z9 681 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TTC22Q5TAA0 569 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 RGMBQ6NW40 437 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CWC27Q6UX04 472 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 DTHD1Q6ZMT9 781 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CCDC129Q6ZRS4 1044 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 SV2BQ7L1I2 683 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TTC6Q86TZ1 520 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 RELL1Q8IUW5 271 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 STK11IPQ8N1F8 1099 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 MYO1HQ8N1T3 1032 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 MYRIPQ8NFW9 859 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 SDR42E1Q8WUS8 393 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ZNF296Q8WUU4 475 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 ZKSCAN4Q969J2 545 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 NXPE3Q969Y0 559 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 E2F7Q96AV8 911 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 RHOVQ96L33 236 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CAPNS2Q96L46 248 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 FAM227BQ96M60 508 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 WRNIP1Q96S55 665 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 STRBPQ96SI9 672 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 SEC62Q99442 399 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 RIOK1Q9BRS2 568 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 ZNF341Q9BYN7 854 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 OSBPL5Q9H0X9 879 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 NUCKS1Q9H1E3 243 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 DHX36Q9H2U1 1008 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 ST7Q9NRC1 585 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 PICK1Q9NRD5 415 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 GINM1Q9NU53 330 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 PI4KBQ9UBF8 816 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TLR6Q9Y2C9 796 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 FLT1P17948 1338 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 WDR33Q9C0J8 1336 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 RASSF10A6NK89 507 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 HIP1O00291 1037 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ENC1O14682 589 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 GPAA1O43292 621 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 AOC2O75106 756 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 PSAPP07602 524 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CELA3AP09093 270 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CYP2D6P10635 497 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 GSPT1P15170 499 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 GNAT2P19087 354 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CD33P20138 364 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ITPKAP23677 461 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 POU5F1Q01860 360 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 HYAL2Q12891 473 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 NMIQ13287 307 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 PWP1Q13610 501 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 VGLL4Q14135 290 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 MAP3K11Q16584 847 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TMEM95Q3KNT9 176 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 DHX32Q7L7V1 743 aaKnown RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 RAB44Q7Z6P3 723 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 NCAPG2Q86XI2 1143 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 FOXP4Q8IVH2 680 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 CHPFQ8IZ52 775 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 TTC30BQ8N4P2 665 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 DNAJC5GQ8N7S2 189 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 BHMTQ93088 406 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ANAPC16Q96DE5 110 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CLMNQ96JQ2 1002 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 NACAP1Q9BZK3 213 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 BHLHE41Q9C0J9 482 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 HELLSQ9NRZ9 838 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ATP8A2Q9NTI2 1148 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ZIM2Q9NZV7 527 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 ANAPC4Q9UJX5 808 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 DAAM1Q9Y4D1 1078 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CTDP1Q9Y5B0 961 aaPredicted RBP3.22□□□□□ -1.89
SKP1-204ENST00000517691 A0A1B0GUL6 1792 aa3.22□□□□□ -1.89
SKP1-204ENST00000517691 CYP2D7A0A087X1C5 515 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 A0A0D9SFI3 127 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 GSG1L2A8MUP6 293 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 MPHOSPH10O00566 681 aaKnown RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 TIMM44O43615 452 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 KATNA1O75449 491 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 ASMTLO95671 621 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 COL6A1P12109 1028 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 BUD31P41223 144 aaPredicted RBP3.21□□□□□ -1.9
SKP1-204ENST00000517691 TRAPPC10P48553 1259 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 PLCD1P51178 756 aa3.21□□□□□ -1.9
SKP1-204ENST00000517691 TERF1P54274 439 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms