RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SEC23AQ15436 765 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 TERF2Q15554 542 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 IQSEC1Q6DN90 963 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 DPP8Q6V1X1 898 aaPredicted RBP4.2□□□□□ -1.74
SKP1-203ENST00000517625 FRMD7Q6ZUT3 714 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 SYDE1Q6ZW31 735 aaPredicted RBP4.2□□□□□ -1.74
SKP1-203ENST00000517625 RASSF3Q86WH2 238 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 PROSER1Q86XN7 944 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 PHYKPLQ8IUZ5 450 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 RBM12BQ8IXT5 1001 aaKnown RBP4.2□□□□□ -1.74
SKP1-203ENST00000517625 RPUSD2Q8IZ73 545 aaKnown RBP4.2□□□□□ -1.74
SKP1-203ENST00000517625 KYQ8NBH2 561 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 KCNN1Q92952 543 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 MAML3Q96JK9 1138 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 GBP4Q96PP9 640 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 ZMAT4Q9H898 229 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 HOMER2Q9NSB8 354 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 SLC5A4Q9NY91 659 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 RNF114Q9Y508 228 aa4.2□□□□□ -1.74
SKP1-203ENST00000517625 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 UBA6A0AVT1 1052 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 RASSF10A6NK89 507 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 ETV2O00321 342 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 RAB11FIP3O75154 756 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 HSP90B1P14625 803 aaKnown RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 SLC9A1P19634 815 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 CDKN1CP49918 316 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 EPHB3P54753 998 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 ITGA1P56199 1179 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 HTRA3P83110 453 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 TMPRSS15P98073 1019 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 EXOSC10Q01780 885 aaKnown RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 ALDH6A1Q02252 535 aaKnown RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 ROM1Q03395 351 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 TTC38Q5R3I4 469 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 TIGD7Q6NT04 549 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 ESRP1Q6NXG1 681 aaKnown RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 RTN4RL1Q86UN2 441 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 C7orf31Q8N865 590 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 HIPK4Q8NE63 616 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 ACAP3Q96P50 834 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 CEP89Q96ST8 783 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 C11orf84Q9BUA3 381 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 BTBD2Q9BX70 525 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 ZDHHC5Q9C0B5 715 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 BCAS3Q9H6U6 928 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 CD320Q9NPF0 282 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 INCENPQ9NQS7 918 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 GALNT8Q9NY28 637 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 H2AFY2Q9P0M6 372 aaPredicted RBP4.19□□□□□ -1.74
SKP1-203ENST00000517625 FBXO10Q9UK96 956 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 SPEF1Q9Y4P9 236 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 PMF1-BGLAPU3KQ54 211 aa4.19□□□□□ -1.74
SKP1-203ENST00000517625 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 MPIG6BO95866 241 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 PRLP01236 227 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 MC3RP41968 323 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 GUCY2FP51841 1108 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 KRT85P78386 507 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 PFKPQ01813 784 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 STILQ15468 1287 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 PKN1Q16512 942 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 SKIDA1Q1XH10 827 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 ZNF385BQ569K4 471 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 BROXQ5VW32 411 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 LIPIQ6XZB0 460 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 ESPNLQ6ZVH7 1005 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 HDGFL2Q7Z4V5 671 aaPredicted RBP4.18□□□□□ -1.74
SKP1-203ENST00000517625 KRTAP1-3Q8IUG1 177 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 CILP2Q8IUL8 1156 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 TMEM151BQ8IW70 566 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 WDR48Q8TAF3 677 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 RSAD2Q8WXG1 361 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 FOXRED1Q96CU9 486 aaPredicted RBP4.18□□□□□ -1.74
SKP1-203ENST00000517625 GORASP1Q9BQQ3 440 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 FAM126AQ9BYI3 521 aaPredicted RBP4.18□□□□□ -1.74
SKP1-203ENST00000517625 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 DDX56Q9NY93 547 aaKnown RBP4.18□□□□□ -1.74
SKP1-203ENST00000517625 ARHGAP20Q9P2F6 1191 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 KCNG1Q9UIX4 513 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 PLA2G2DQ9UNK4 145 aa4.18□□□□□ -1.74
SKP1-203ENST00000517625 SH3D21A4FU49 640 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 PPM1GO15355 546 aaPredicted RBP4.17□□□□□ -1.74
SKP1-203ENST00000517625 KDM1AO60341 852 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 FBXO21O94952 628 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 PTX3P26022 381 aaPredicted RBP4.17□□□□□ -1.74
SKP1-203ENST00000517625 APEX1P27695 318 aaKnown RBP4.17□□□□□ -1.74
SKP1-203ENST00000517625 THBS2P35442 1172 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 TXKP42681 527 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 ECE1P42892 770 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 ID4P47928 161 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 NCKAP1LP55160 1127 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 BCAR1P56945 870 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 MAP3K12Q12852 859 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 NFATC3Q12968 1075 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 ADAM9Q13443 819 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 OGFOD2Q6N063 350 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 KIAA1841Q6NSI8 718 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 CNKSR3Q6P9H4 555 aa4.17□□□□□ -1.74
SKP1-203ENST00000517625 TMC5Q6UXY8 1006 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms