RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TOP1P11387 765 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 GSTT1P30711 240 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCT8P50990 548 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCNG1P51959 295 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 HDAC4P56524 1084 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 KRT85P78386 507 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 PDE1BQ01064 536 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 ID3Q02535 119 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 XRCC4Q13426 336 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 STIM1Q13586 685 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 MYBPC3Q14896 1274 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 RCN1Q15293 331 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 PKN1Q16512 942 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 STX1AQ16623 288 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 LACTB2Q53H82 288 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 RNF187Q5TA31 235 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 EMC10Q5UCC4 262 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 ALS2CLQ60I27 953 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 FAAH2Q6GMR7 532 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 THOC7Q6I9Y2 204 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 IQCEQ6IPM2 695 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 GIMAP6Q6P9H5 292 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 OLFML1Q6UWY5 402 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CACNA2D4Q7Z3S7 1137 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC83Q8IWF9 413 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 FUKQ8N0W3 1084 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 FAM181AQ8N9Y4 354 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 C1orf131Q8NDD1 294 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 VPS37AQ8NEZ2 397 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 TRPC4APQ8TEL6 797 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 NSMCE1Q8WV22 266 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 IL17RAQ96F46 866 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 DUSP9Q99956 384 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 YIPF3Q9GZM5 350 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 SLC39A2Q9NP94 309 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 DISC1Q9NRI5 854 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 ANO10Q9NW15 660 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 CARD8Q9Y2G2 431 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 SH3GLB1Q9Y371 365 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTLL3Q9Y4R7 772 aa5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 TCOF1Q13428 1488 aaKnown RBP5.3□□□□□ -1.56
HMGB1P19-201ENST00000517578 UBN2Q6ZU65 1347 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTC21BQ7Z4L5 1316 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SH3TC1Q8TE82 1336 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTAGE15A4D2H0 777 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MYO1FO00160 1098 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 GIPC1O14908 333 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ARHGAP6O43182 974 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MMEP08473 750 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 RPSAP08865 295 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 USP17L7P0C7H9 530 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTAGE8P0CG41 777 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CD8BP10966 210 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 EPB41P11171 864 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 RPL17P18621 184 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTCFP49711 727 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ACADVLP49748 655 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SERPINB8P50452 374 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 KIF5AQ12840 1032 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CBX3Q13185 183 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SEPT6Q14141 434 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SPIDRQ14159 915 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 IFI16Q16666 785 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ANO6Q4KMQ2 910 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CFAP157Q5JU67 520 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 UBE2Q1Q7Z7E8 422 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTAGE6Q86UF2 777 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTAGE4Q8IX94 777 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SMYD4Q8IYR2 804 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZGPATQ8N5A5 531 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 C3orf58Q8NDZ4 430 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 NETO1Q8TDF5 533 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 IFT81Q8WYA0 676 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTNNBL1Q8WYA6 563 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 IQCDQ96DY2 449 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MISP3Q96FF7 219 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 NAF1Q96HR8 494 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MPP4Q96JB8 637 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZSCAN31Q96LW9 406 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CGREF1Q99674 301 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 BPIFA3Q9BQP9 254 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SRCIN1Q9C0H9 1055 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 EPN3Q9H201 632 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MRPL46Q9H2W6 279 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ATXN3LQ9H3M9 355 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 C12orf49Q9H741 205 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SYNCQ9H7C4 482 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZBTB40Q9NUA8 1239 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 GALNT8Q9NY28 637 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 AATFQ9NY61 560 aaKnown RBP eCLIP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms