RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 TRMT1LQ7Z2T5 733 aaKnown RBP23.82■■□□□ 1.4
MTCL1-204ENST00000517554 MTMR9Q96QG7 549 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 CXXC1Q9P0U4 656 aaPredicted RBP23.82■■□□□ 1.4
MTCL1-204ENST00000517554 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.82■■□□□ 1.4
MTCL1-204ENST00000517554 RRN3P2A6NIE6 340 aa23.81■■□□□ 1.4
MTCL1-204ENST00000517554 HBP1O60381 514 aa23.81■■□□□ 1.4
MTCL1-204ENST00000517554 TCTN1Q2MV58 587 aa23.81■■□□□ 1.4
MTCL1-204ENST00000517554 OTOP2Q7RTS6 562 aa23.81■■□□□ 1.4
MTCL1-204ENST00000517554 RDM1Q8NG50 284 aa23.81■■□□□ 1.4
MTCL1-204ENST00000517554 RNPC3Q96LT9 517 aaKnown RBP23.81■■□□□ 1.4
MTCL1-204ENST00000517554 STBD1O95210 358 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 FGBP02675 491 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 RFC2P35250 354 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 TOB1P50616 345 aaPredicted RBP23.8■■□□□ 1.4
MTCL1-204ENST00000517554 NBR1Q14596 966 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 RPUSD2Q8IZ73 545 aaKnown RBP23.8■■□□□ 1.4
MTCL1-204ENST00000517554 HERVK_113Q902F9 699 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 KIF3AQ9Y496 699 aa23.8■■□□□ 1.4
MTCL1-204ENST00000517554 NEMFO60524 1076 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 CXCL10P02778 98 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 CTSHP09668 335 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 MCM7P33993 719 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 FAM109BQ6ICB4 259 aaPredicted RBP23.79■■□□□ 1.4
MTCL1-204ENST00000517554 RPAINQ86UA6 219 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 CKAP2LQ8IYA6 745 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 DNAJB3Q8WWF6 145 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 BBXQ8WY36 941 aaPredicted RBP23.79■■□□□ 1.4
MTCL1-204ENST00000517554 TET1Q8NFU7 2136 aa23.79■■□□□ 1.4
MTCL1-204ENST00000517554 RSPH10B2B2RC85 870 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 K7ELQ4 463 aaPredicted RBP23.78■■□□□ 1.4
MTCL1-204ENST00000517554 RSPH10BP0C881 870 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 PRKCEQ02156 737 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 ZNF174Q15697 407 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 CALCRLQ16602 461 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 TAF2Q6P1X5 1199 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 MTHFD1LQ6UB35 978 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 SLFN12Q8IYM2 578 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 SNX21Q969T3 373 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 WRAP73Q9P2S5 460 aaPredicted RBP23.78■■□□□ 1.4
MTCL1-204ENST00000517554 WDR81Q562E7 1941 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 KLRC1P26715 233 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 GNL2Q13823 731 aaKnown RBP23.78■■□□□ 1.4
MTCL1-204ENST00000517554 BANK1Q8NDB2 785 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 PCDHA2Q9Y5H9 948 aa23.78■■□□□ 1.4
MTCL1-204ENST00000517554 COL1A2P08123 1366 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 TMEM150BA6NC51 233 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 CAND2O75155 1236 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 CHRNA1P02708 482 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 OATP04181 439 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 PFKMP08237 780 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 MGAT3Q09327 533 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 ZNF484Q5JVG2 852 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 FAM26DQ5JW98 314 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 TTC38Q5R3I4 469 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 LARP1BQ659C4 914 aaKnown RBP23.77■■□□□ 1.4
MTCL1-204ENST00000517554 C4orf32Q8N8J7 132 aa23.77■■□□□ 1.4
MTCL1-204ENST00000517554 TNPO1Q92973 898 aaKnown RBP23.77■■□□□ 1.4
MTCL1-204ENST00000517554 FAM49AQ9H0Q0 323 aaPredicted RBP23.77■■□□□ 1.4
MTCL1-204ENST00000517554 MARCH6O60337 910 aa23.76■■□□□ 1.39
MTCL1-204ENST00000517554 BAG4O95429 457 aaKnown RBP23.76■■□□□ 1.39
MTCL1-204ENST00000517554 C22orf31O95567 290 aa23.76■■□□□ 1.39
MTCL1-204ENST00000517554 TXKP42681 527 aa23.76■■□□□ 1.39
MTCL1-204ENST00000517554 TTC12Q9H892 705 aaPredicted RBP23.76■■□□□ 1.39
MTCL1-204ENST00000517554 PCDHA12Q9UN75 941 aa23.76■■□□□ 1.39
MTCL1-204ENST00000517554 KAT6AQ92794 2004 aa23.76■■□□□ 1.39
MTCL1-204ENST00000517554 TRAPPC10P48553 1259 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 EPHA7Q15375 998 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 MCTP1Q6DN14 999 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 NCAPH2Q6IBW4 605 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 FAM167AQ96KS9 214 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 CEP89Q96ST8 783 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 FTOQ9C0B1 505 aaKnown RBP eCLIP23.75■■□□□ 1.39
MTCL1-204ENST00000517554 FOXD4L1Q9NU39 408 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 RGL1Q9NZL6 768 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 PCDHB6Q9Y5E3 794 aa23.75■■□□□ 1.39
MTCL1-204ENST00000517554 SMIM35A0A1B0GVV1 85 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 GRXCR1A8MXD5 290 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 H3BQV1 296 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 PARNO95453 639 aaKnown RBP23.74■■□□□ 1.39
MTCL1-204ENST00000517554 TARBP2Q15633 366 aaKnown RBP23.74■■□□□ 1.39
MTCL1-204ENST00000517554 INTS4Q96HW7 963 aaKnown RBP23.74■■□□□ 1.39
MTCL1-204ENST00000517554 SH2D3AQ9BRG2 576 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 MYH9P35579 1960 aaKnown RBP23.74■■□□□ 1.39
MTCL1-204ENST00000517554 SIP14410 1827 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 TMEM62Q0P6H9 643 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 ANO5Q75V66 913 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 KIAA0319LQ8IZA0 1049 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 LINC01465Q8N7H1 131 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 DYDC2Q96IM9 177 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 NRBP2Q9NSY0 501 aa23.74■■□□□ 1.39
MTCL1-204ENST00000517554 P4HBP07237 508 aaKnown RBP23.73■■□□□ 1.39
MTCL1-204ENST00000517554 QARSP47897 775 aaKnown RBP23.73■■□□□ 1.39
MTCL1-204ENST00000517554 PSMC5P62195 406 aa23.73■■□□□ 1.39
MTCL1-204ENST00000517554 ORC2Q13416 577 aaPredicted RBP23.73■■□□□ 1.39
MTCL1-204ENST00000517554 XKR3Q5GH77 459 aa23.73■■□□□ 1.39
MTCL1-204ENST00000517554 DBF4BQ8NFT6 615 aa23.73■■□□□ 1.39
MTCL1-204ENST00000517554 NIFKQ9BYG3 293 aaKnown RBP23.73■■□□□ 1.39
MTCL1-204ENST00000517554 NOL7Q9UMY1 257 aaKnown RBP23.73■■□□□ 1.39
MTCL1-204ENST00000517554 CDY2AQ9Y6F7 541 aa23.73■■□□□ 1.39
MTCL1-204ENST00000517554 POTEMA6NI47 508 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms