RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 TMEM266Q2M3C6 531 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SPOUT1Q5T280 376 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 RTN4RL1Q86UN2 441 aaPredicted RBP17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MICU3Q86XE3 530 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TMTC2Q8N394 836 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PGBD1Q96JS3 809 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PADI3Q9ULW8 664 aa17.42■□□□□ 0.38
CSGALNACT1-204ENST00000517494 NRIP1P48552 1158 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 ACTR2P61160 394 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 NFX1Q12986 1120 aaKnown RBP17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 ADAM15Q13444 863 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 P2RX5Q93086 422 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MFSD14AQ96MC6 490 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 KCNH7Q9NS40 1196 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
CSGALNACT1-204ENST00000517494 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PIEZO1Q92508 2521 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 DDX39AO00148 427 aaKnown RBP17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MAFGO15525 162 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 STAT5BP51692 787 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 NAPAP54920 295 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 KRT76Q01546 638 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 COL9A3Q14050 684 aaPredicted RBP17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CYP2W1Q8TAV3 490 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 SPPL3Q8TCT6 385 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 CELF4Q9BZC1 486 aaKnown RBP17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 BARX2Q9UMQ3 279 aaPredicted RBP17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 IGSF9BQ9UPX0 1349 aa17.4■□□□□ 0.38
CSGALNACT1-204ENST00000517494 BACH1O14867 736 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 NAALADL2Q58DX5 795 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 HERC4Q5GLZ8 1057 aaPredicted RBP17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 EFHBQ8N7U6 833 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 FANCBQ8NB91 859 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 MTA3Q9BTC8 594 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 PCDHB7Q9Y5E2 793 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SQORQ9Y6N5 450 aa17.39■□□□□ 0.37
CSGALNACT1-204ENST00000517494 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SLC27A2O14975 620 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ARP10275 920 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 LIFRP42702 1097 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 WWC2Q6AWC2 1192 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 MTHFD1LQ6UB35 978 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SYNE3Q6ZMZ3 975 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 PLPPR4Q7Z2D5 763 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 MSLNLQ96KJ4 702 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TMX1Q9H3N1 280 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TLE6Q9H808 572 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 CLEC1BQ9P126 229 aa17.38■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 DENND3A2RUS2 1198 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 PER2O15055 1255 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ZNF76P36508 570 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ADCY7P51828 1080 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 IRX6P78412 446 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ITGB3BPQ13352 177 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SMRP1Q8NCR6 262 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 EDAQ92838 391 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ANO3Q9BYT9 981 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 KCNH6Q9H252 994 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 AGO4Q9HCK5 861 aaKnown RBP17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 USP15Q9Y4E8 981 aaPredicted RBP17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 PCDHB12Q9Y5F1 795 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 NFASCO94856 1347 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TTC3P53804 2025 aa17.37■□□□□ 0.37
CSGALNACT1-204ENST00000517494 WDFY4Q6ZS81 3184 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 EYA4O95677 639 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 KLRC1P26715 233 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 SARSP49591 514 aaKnown RBP17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 CEP55Q53EZ4 464 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 FAM160B1Q5W0V3 765 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 CREB3L3Q68CJ9 461 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TRMT1LQ7Z2T5 733 aaKnown RBP17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 THNSL1Q8IYQ7 743 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 NME8Q8N427 588 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 RPGRIP1Q96KN7 1286 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ADAM2Q99965 735 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 ANO2Q9NQ90 1003 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 AAASQ9NRG9 546 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TMEM260Q9NX78 707 aa17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
CSGALNACT1-204ENST00000517494 TMEM221A6NGB7 291 aa17.35■□□□□ 0.37
CSGALNACT1-204ENST00000517494 M0R296 226 aa17.35■□□□□ 0.37
CSGALNACT1-204ENST00000517494 MGEA5O60502 916 aa17.35■□□□□ 0.37
CSGALNACT1-204ENST00000517494 GLP2RO95838 553 aa17.35■□□□□ 0.37
CSGALNACT1-204ENST00000517494 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms